Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4240g00034 ATGGGTGATCATCCTAAGGACATGGACTACACATCCTTACCTTTTCTTCATATGGACATGGCTCAAAAGATCCTTGGCAGTGATTTTGCACCAGAAGCTATACTTCACAGCTACAAGAGCTTTAATGGGTTCGTCATGAAGTTAAACGAAGAGGAGGCGGAAAGAATGGCAGAAATGGACACTGTCGTCTCTGTTTTCCCAAATAAAAAGAACCGTCTTCCCACAACAAGATCGTGGGACTTCCTAGACTTTCCCCAGCAAGTCAAAAGAACAAGTATTGAGAGTGACATAATTGTGGGAGTATTAGACGGTGGAATTTGGCCAGAGTCTGAGAGCTTCAGTGACAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGTTCATGCCATAACTTTACCTGCAACAACAAAGTGATAGGTGCGAAATACTTTAATATCGAAAATGATTATACCAAAGAGGACATAAAATCTCCTAGGGATTCAGATGGGCACGGGTCACACTGTGCATCTACGATTGCTGGAAACTTGGTTAACCATGCAAGTCTACTAGGCTTTGCCAGCGGAACAGCCCGTGGAGGAGTTCCATCAGCTCGAATTGCTGTGTACAAAATATGTTGGAAATTTTGTTATGATGCTGACACACTTGCAGCATTTGATGAAGCAATTATTGATGGAGTTGACTTTATTTCTACATCAACGGGACCATTGGGCATAGTACACCCTGAGTATTTTGATAGCCCAATTAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTGACGTCACATGCTGCTGGTAATGAGGGTCCGAAGCTTTACTCTATGACAAATTATCCCCCTTGGTTACTTTCTGTGGCTGCTACCACTATTAACAGAATGTTCCTTACCAAGCTTCAATTGGGCAATGGCATGGTTTATGAGGGGGTTTCAATTAACACATTTGATCTGAAAAGCAAAATGTTTCCCCTGATTTTCTCATCCGGGATTTGCAGCGAGAAGACTTTGGATAAACGTTTGGTGAAGGGAAAGATCGTTCTATGTAATGGCTTCAACCGTACAGAGATTGGGTTTTTGTATGGTGCAGTTGGTATTATTCTTGTAAGCACTGGTCAGAAAGACCTCCCCAGTACATATGCCTTGCCTGCCACTACTCTCACTCTTACCGACGCTAGACTCGTAAGATCTTACATTGCTTCAGCGAGCAAAAATGCAACAGCCACCATATTCAGGAGTGAAGAAGTCAATAATTCGTTAGCACCTTACGTAGCTTCGTTCTCAGCAAGAGGTCCAAATCCAATTACTCCAAACATTCTTAAGCCTGATCTCGCTGCCCCAGGTGTTAATATTATAGCTGCATATTGTCCAATCTCCCCAATTTCAGATGTCAAAGGTGACAAAAGACTAGTAAAATATAATGTAATTTCTGGCACTTCAATGGCTTGTCCTCATGCCGCTGGGGCAGCTGTATACGTCAAATCATTTCACCCCAATTGGTCTGCTGCTATGATCAAGTCTGCCTTGATGACCACTGCTACTCCAATGAGTGCTACTCTTAATCCTGAAGCTGAATTTGCATATGGGGCGGGGGAAATTAATCCACTTAAGGCAGCAAATCCTGGTTTAGTATATGATATTAGCAAAGCAGATTATGTCAAGTTCTTATGCGGTGAAGGGTATACAAATAAAAAGCTCAGAGTACTCACTCAAGATCATGCTAATTGCCGCAAAAATGCTAACAAGGTAGCTGTATACGACCTTAATCTCCCATCATTTGCTCTTAAAGTGAACGCCTCTTTCTATCGTGTTTTCCGTCGAACAGTTACAAATATGGGATCGGCAACATCTAGTTATAAAGCCAAATTGATGTTTCCATCTTTCTTGGAAATTCAAGTGAAACCAGATGTTCTGTCCTTCACATCTATTGGGCAGAAAAAGTCATTCTCGGTCATAATTACTGGGAAGATTAATGTGGAAATAATCTCTGCCTCTTTGGTTTGGGATGATGGCAAATATCAAGTTAGAAGTCCAATTGTAATATATGCGGATCCTTGA 2055 0.4165 MGDHPKDMDYTSLPFLHMDMAQKILGSDFAPEAILHSYKSFNGFVMKLNEEEAERMAEMDTVVSVFPNKKNRLPTTRSWDFLDFPQQVKRTSIESDIIVGVLDGGIWPESESFSDKGFGPPPSKWKGSCHNFTCNNKVIGAKYFNIENDYTKEDIKSPRDSDGHGSHCASTIAGNLVNHASLLGFASGTARGGVPSARIAVYKICWKFCYDADTLAAFDEAIIDGVDFISTSTGPLGIVHPEYFDSPINIGSFHAMKRGILTSHAAGNEGPKLYSMTNYPPWLLSVAATTINRMFLTKLQLGNGMVYEGVSINTFDLKSKMFPLIFSSGICSEKTLDKRLVKGKIVLCNGFNRTEIGFLYGAVGIILVSTGQKDLPSTYALPATTLTLTDARLVRSYIASASKNATATIFRSEEVNNSLAPYVASFSARGPNPITPNILKPDLAAPGVNIIAAYCPISPISDVKGDKRLVKYNVISGTSMACPHAAGAAVYVKSFHPNWSAAMIKSALMTTATPMSATLNPEAEFAYGAGEINPLKAANPGLVYDISKADYVKFLCGEGYTNKKLRVLTQDHANCRKNANKVAVYDLNLPSFALKVNASFYRVFRRTVTNMGSATSSYKAKLMFPSFLEIQVKPDVLSFTSIGQKKSFSVIITGKINVEIISASLVWDDGKYQVRSPIVIYADP 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4240g00034 684 FunFam Subtilisin-like protease SBT1.5 96 301 - -
Gabi4240g00034 684 Pfam Peptidase inhibitor I9 17 73 IPR010259 -
Gabi4240g00034 684 ProSitePatterns Serine proteases, subtilase family, serine active site. 477 487 IPR023828 -
Gabi4240g00034 684 CDD PA_subtilisin_like 299 409 - -
Gabi4240g00034 684 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Gabi4240g00034 684 Gene3D - 292 416 - -
Gabi4240g00034 684 ProSiteProfiles Serine proteases, subtilase domain profile. 78 538 - -
Gabi4240g00034 684 PRINTS Subtilisin serine protease family (S8) signature 160 173 IPR015500 -
Gabi4240g00034 684 PRINTS Subtilisin serine protease family (S8) signature 476 492 IPR015500 -
Gabi4240g00034 684 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Gabi4240g00034 684 Gene3D - 555 683 - -
Gabi4240g00034 684 SUPERFAMILY Subtilisin-like 73 542 IPR036852 GO:0004252|GO:0006508
Gabi4240g00034 684 Gene3D Peptidase S8/S53 domain 96 551 IPR036852 GO:0004252|GO:0006508
Gabi4240g00034 684 Pfam Subtilase family 95 530 IPR000209 GO:0006508|GO:0008236
Gabi4240g00034 684 CDD Peptidases_S8_3 75 513 IPR034197 -
Gabi4240g00034 684 ProSitePatterns Serine proteases, subtilase family, histidine active site. 164 174 IPR022398 -
Gabi4240g00034 684 Pfam Fibronectin type-III domain 586 680 IPR041469 -
Gabi4240g00034 684 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 679 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4240g00034 Gabi-Chr4240 259027 264570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4240g00034 1 682 Subtilisin-like Serine Gene Family AT5G59190 47.955 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4240g00034 - - gmx:100815516 972.615