Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4240g00031 ATGGTCTCCTTAAGGCCATGCCTTCTTTTCATTCTTATCTGCATTTTGATAATTAATCAGGCATATTCCAAGAATGATCGGAAGACTTATATTGTCTACATGCGTGATCATCCTAAGGACATGGACTCCACATCCTTACCTTTTCGTCATATGGACATGGCTCAAAAGATCCTTGGCAGTGATTTTGCACCAGAAGCTATACTTCACAGCTACAAGAGCTTTAATGGGTTCGTCATGAAATTAACAGAAGAAGAGGCGGAAAGAATGGCAGAAATGGACACTGTCGTCTCTGTTTTCCCAAACAAAAAGAACCGACTTCGCACAACAAGATCGTGGGACTTCCTAGGCTTTCCCCAGCGAGTCAAAAGAACAAGTATTGAGAGTGACATAATTGTTGGAGTAATAGACTCAGGAATTTGGCCAGAGTCTGAGAGCTTCAGTGACAAAGGATTTGGTCCACCACCAAGCAAATGGAAGGGTTCATGCCATAACTTTACCTGCAACAACAAAGTGATTGGTGCAAAATACTTTAATATCGAAAGTGATTATACCAAAGGGGACATAAAATCTCCTAGGGATACAGAAGGGCACGGGTCACACTGCACATCAACAATTGCTGGAAACTTGGTTAACCATGCAAGTCTACTAGGCTTTGCCAGCGGAACAGCCCGTGGAGGAGTTCCATCAGCACGAATTGCTATGTACAAAATATGTTGGAAATCTGGTTGTGATGATGCTGACACACTTGCAGCATTTGATGAAGCAATTGCTGATGGAGTTGACTTGATTTCTATATCAACGGGACCAGTTGTACACCCTGAGTATTTTGAAGAAGGAATTAATATAGGAAGTTTCCATGCAATGAAAAGAGGCATATTGACGTCAAATGCAGCAGGTAATGAGGGTCCGGAGCTTTACTCTATGACAAATTATCCCCCTTGGTTACTTTCTGTGGCTGCTACCACTATTAACAGAATGTTCCTTACCAAGCTTCAATTGGGCAATGGCATGGTTTATGAGGGGGTTTCAATGAACACATTCGATCTCAAAGGCAAAATGTTTCCCCTGATTTTCTCATCCGGGAGTTGCAGCGAGAAGACTTTGGATAAACGTTTGGTGAAGGGAAAGATCGTTCTATGTAATGACTACAACGGTACAGATATTGGGTTTTTGTCTGGTGCAGTTGGTTTTATTGTTATACGTACAGATATTGAGAAAGACCTCCCCAGTACATATGCCCTGCCTTCCACTGCTCTCACTCTTACCGACGCCAGACTCGTAAAATCTTACATTGTTTCAGCGAGCAAGAATGCAACAGCCACCATATTCAGGAGTGAAGAAGTCAATAATTCGTTAGCACCTTACGTAGCTTCGTTCTCAGCAAGAGGTCCAAATCCAATTACTCCAAACATTCTTAAGCCTGATCTCGCTGCCCCAGGTGTTAATATTATAGCTGCATATTCTCCAATGTCCCCAATTTCAGATGTCCAAGGTGACAAAAGACTAGTAAACTATAATGTAATTTCTGGCACTTCAATGGCTTGTCCTCATGCCGCTGGGGCAGCTGTCTACGTCAAATCATTTCACCCCAATTGGTCTGCTGCTATGATCAAGTCTGCCTTGATGACCACAGCTACCCCAATGAGGTTATAAGGGTAAAAAAGCCCAATGAGTGCTGCTCTTAATCCTGAAGCTGAATTTGCATATGGAGCGGGGCAAATTAATCCACTTAAGGCAGCAAATCCTGGTTTAGTATATGATATTAGCGAAGCAGATTATGTCAAGTTCTTATGCGGTGAAGGGTATACAAATGAAAAGCTCAGAGTACTCACTCCAGATCATGCTAATTGCAGCAAGAATGCTAACAAGTTAGCTGTATACGATCTTAATCTCCCATCATTTGCTCTCAAAGTAAACGCCTCTTTCTATCGTACATTCCATCGTACAGTTATAAATGTGGGATCGGCAACATCTAGTTATAAAGCCCAATTAATGTTTCCATCATTCTTGGATATTCAAGCGAAACCAGATGTTCTGTCCTTCACATCTATTGGGCAGAAAAAGTCATTCTCGGTTATAATTACTGGGAAGATTAATGTGGAAATAACCTCTGCCTCTTTGGTTTGGGATGATGGCAATTACCAAGTTAGAAGTCCAATTGTAATATATGGGGATGCTTGA 2181 0.4177 MVSLRPCLLFILICILIINQAYSKNDRKTYIVYMRDHPKDMDSTSLPFRHMDMAQKILGSDFAPEAILHSYKSFNGFVMKLTEEEAERMAEMDTVVSVFPNKKNRLRTTRSWDFLGFPQRVKRTSIESDIIVGVIDSGIWPESESFSDKGFGPPPSKWKGSCHNFTCNNKVIGAKYFNIESDYTKGDIKSPRDTEGHGSHCTSTIAGNLVNHASLLGFASGTARGGVPSARIAMYKICWKSGCDDADTLAAFDEAIADGVDLISISTGPVVHPEYFEEGINIGSFHAMKRGILTSNAAGNEGPELYSMTNYPPWLLSVAATTINRMFLTKLQLGNGMVYEGVSMNTFDLKGKMFPLIFSSGSCSEKTLDKRLVKGKIVLCNDYNGTDIGFLSGAVGFIVIRTDIEKDLPSTYALPSTALTLTDARLVKSYIVSASKNATATIFRSEEVNNSLAPYVASFSARGPNPITPNILKPDLAAPGVNIIAAYSPMSPISDVQGDKRLVNYNVISGTSMACPHAAGAAVYVKSFHPNWSAAMIKSALMTTATPMRLXGXKSPMSAALNPEAEFAYGAGQINPLKAANPGLVYDISEADYVKFLCGEGYTNEKLRVLTPDHANCSKNANKLAVYDLNLPSFALKVNASFYRTFHRTVINVGSATSSYKAQLMFPSFLDIQAKPDVLSFTSIGQKKSFSVIITGKINVEITSASLVWDDGNYQVRSPIVIYGDA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4240g00031 726 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Gabi4240g00031 726 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Gabi4240g00031 726 PRINTS Subtilisin serine protease family (S8) signature 509 525 IPR015500 -
Gabi4240g00031 726 CDD Peptidases_S8_3 106 546 IPR034197 -
Gabi4240g00031 726 FunFam Subtilisin-like protease SBT1.5 129 333 - -
Gabi4240g00031 726 SUPERFAMILY Subtilisin-like 106 584 IPR036852 GO:0004252|GO:0006508
Gabi4240g00031 726 Gene3D Peptidase S8/S53 domain 129 593 IPR036852 GO:0004252|GO:0006508
Gabi4240g00031 726 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 107 IPR037045 -
Gabi4240g00031 726 Pfam Peptidase inhibitor I9 29 106 IPR010259 -
Gabi4240g00031 726 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 721 IPR045051 -
Gabi4240g00031 726 ProSiteProfiles Serine proteases, subtilase domain profile. 111 580 - -
Gabi4240g00031 726 ProSitePatterns Serine proteases, subtilase family, serine active site. 510 520 IPR023828 -
Gabi4240g00031 726 Gene3D - 324 449 - -
Gabi4240g00031 726 Pfam Fibronectin type-III domain 628 722 IPR041469 -
Gabi4240g00031 726 CDD PA_subtilisin_like 331 442 - -
Gabi4240g00031 726 Gene3D - 597 724 - -
Gabi4240g00031 726 Pfam Subtilase family 128 572 IPR000209 GO:0006508|GO:0008236
Gabi4240g00031 726 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4240g00031 Gabi-Chr4240 227447 238148 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4240g00031 26 723 Subtilisin-like Serine Gene Family AT5G59100 47.165 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4240g00031 - - gmx:100787973 1019.61