Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4238g00065 ATGGAATCCAAAATTCAACTCTTTTTCTTCACCCTTTTCCTCCTCACTCTTACCACCCATGCAAAAACTCTTCAAACTTACATAGTTCAGCTACACCCTCATGCCATAACCAGCTCTATCTTCACCTCCAAACTCAAATGGCATCTTTCATTTATACAACAAACCATTTCCTCAGATGAGGACCCTTCTTCACGCCTCCTCTATTCTTACCGTTCAGCCATGGACGGTTTTGCAGCTCAGCTAACTGAGTCTGAGCTTGAGTACCTACAAAAGTTACCTGATGTTATCTCAATTAGGCCAGACCAAAAGCTCCAGATTCAGACCACATATTCTTACAAGTTCTTGGGATTAAACCCCGCAAGAGAAAATGGTTGGTTTCAATCTGGATTTGGCAGGGGAACCATAATTGGGGTGCTTGATACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCACGGAATGCCTCCAATTCCCAAGAAATGGAAGGGTAAATGCCAAGCAGGACAAGCCTTTAACTCTTCCAATTGTAACAGAAAACTCATTGGTGCAAGGTACTTTACCAAAGGCCATTTTGCAGTATCACCTTCAAGAATTCCAGAATATCTCTCTCCAAGAGACTCATCTGGACATGGCACACACACTTCTTCCACAGCTGGTGGAGTTGCAGTGCCAATGGCAAGTGTTTTTGGTTATGCAGCTGGTGTGGCAAGAGGAATGGCTCCTGGTGCTCACATTGCAATCTACAAAGTTTGCTGGTTCAATGGCTGCTATAACTCTGATATCATGGCTGCATTGGATGTGGCAATCAGAGATGGTGTGGACATTCTATCATTGTCTCTTGGTGGCTTCCCAGTGCCTCTTTATGATGATAGTATTGCCATTGGTAGCTTTAGAGCAATGGAGCATGGGATTTCAGTTATATGTGCTGCAGGAAACAATGGCCCAATAGCAATGTCTGTTGCCAATGAAGCTCCTTGGATTGCTACTGTTGGTGCAAGCACACTAGATAGGAAATTCCCAGCTTTAGTTCGCATGGGTAATGGACAAGTTCTCTATGGAGAATCCATGTACCCAATGAACAGAATAATGAGCAATGACAAAGAACTTGAGCTGGTTTATTTGACTCATGGAGAAATGGAGAGTCAATTTTGCCTTAGAGGGTCTCTTCCAAGGGACAAAGTTCAAGGCAAAATGGTGGTCTGTGATCGAGGTATCAATGGAAGAGCAGAAAAAGGCCAAGTTGTGAAGGAGGCTGGTGGTGCTGCTATGATCTTGGCAAACACAGAGCTAAACTTGGAAGAGGATTCAGTTGATGTTCATGTCTTGCCAGCAACTTTGTTAGGATTTGATGAATCAGTCACCTTGAAAGCTTACATAAACTCTACAACGAGGCCTCTTGCTCGAATTGAATTTGGAGGAACTGTAATAGGGAAGTCTAGAGCTCCAGCAGTAGCAAGATTTTCAGGTAGAGGACCAAGTTTTTCAAACCCTTCAATCCTCAAACCAGATGTTATAGCTCCAGGAGTGAACATCATTGCTGCATGGCCTCAGAACCTTGGTCCTACAGGTCTTCCAGAGGATTCTAGAAGAGTGAATTTCTCTGTCATGTCTGGTACCTCAATGGCATGTCCTCATATTAGTGGAATTGCTGCTCTTATTCGTTCAGCTCACCCTAGTTGGACCCCTGCAGCTATCAAATCTGCAATCATGACAACAGCTGAGATAACTGACCACACAGGAAGTCCAATTCTAGATGAAGATAAACCAGCTGATGCTTTTGCCATAGGAGCAGGAAATGTGAATCCACAAAGAGCATTAAATCCAGGACTTATATATGACATTAGGCCTGATGACTATGTTACACATCTTTGCAGCATTGGATATACAAGTTCAGAAATATTCAGTATCACTCACAGAAATGTTAGTTGCCATGCAATCATGCAGATGAATAGAGGATTCAGCCTTAACTATCCTTCATTCTCAGTAACTTTTAAGGATGGAATGAGGAGAAAGATGTTCAGCAGGAGACTAACAAATGTGGGAAGTCCTGACTCCATCTACTCAGTGGAGGTTATGGCACCTGAAGGAGTGAAAGTGATAGTGAAACCCAAGAGACTGGTATTTAAACAAATAAACCAAAGCTTGAGTTACAGTGTATGGTTTCTATCAAGAAAGAGGGCTAAAAAGGGTGATGATATTATGACCTTTGCAGATGGGCATTTGACATGGGTACACTCACAAAATGGTTCTTACAAGGTTAGAAGCCCAATAGCAGTGACTTGGAAGTCTAAGTAG 2298 0.4286 MESKIQLFFFTLFLLTLTTHAKTLQTYIVQLHPHAITSSIFTSKLKWHLSFIQQTISSDEDPSSRLLYSYRSAMDGFAAQLTESELEYLQKLPDVISIRPDQKLQIQTTYSYKFLGLNPARENGWFQSGFGRGTIIGVLDTGVWPESPSFNDHGMPPIPKKWKGKCQAGQAFNSSNCNRKLIGARYFTKGHFAVSPSRIPEYLSPRDSSGHGTHTSSTAGGVAVPMASVFGYAAGVARGMAPGAHIAIYKVCWFNGCYNSDIMAALDVAIRDGVDILSLSLGGFPVPLYDDSIAIGSFRAMEHGISVICAAGNNGPIAMSVANEAPWIATVGASTLDRKFPALVRMGNGQVLYGESMYPMNRIMSNDKELELVYLTHGEMESQFCLRGSLPRDKVQGKMVVCDRGINGRAEKGQVVKEAGGAAMILANTELNLEEDSVDVHVLPATLLGFDESVTLKAYINSTTRPLARIEFGGTVIGKSRAPAVARFSGRGPSFSNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMACPHISGIAALIRSAHPSWTPAAIKSAIMTTAEITDHTGSPILDEDKPADAFAIGAGNVNPQRALNPGLIYDIRPDDYVTHLCSIGYTSSEIFSITHRNVSCHAIMQMNRGFSLNYPSFSVTFKDGMRRKMFSRRLTNVGSPDSIYSVEVMAPEGVKVIVKPKRLVFKQINQSLSYSVWFLSRKRAKKGDDIMTFADGHLTWVHSQNGSYKVRSPIAVTWKSK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4238g00065 765 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Gabi4238g00065 765 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Gabi4238g00065 765 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Gabi4238g00065 765 Pfam PA domain 383 451 IPR003137 -
Gabi4238g00065 765 SUPERFAMILY PA domain 364 434 IPR046450 -
Gabi4238g00065 765 SUPERFAMILY Protease propeptides/inhibitors 47 106 - -
Gabi4238g00065 765 FunFam subtilisin-like protease SBT1.5 337 477 - -
Gabi4238g00065 765 SUPERFAMILY Subtilisin-like 107 611 IPR036852 GO:0004252|GO:0006508
Gabi4238g00065 765 Pfam Peptidase inhibitor I9 26 106 IPR010259 -
Gabi4238g00065 765 FunFam Subtilisin-like protease SBT1.9 16 107 - -
Gabi4238g00065 765 FunFam Subtilisin-like protease SBT1.5 133 348 - -
Gabi4238g00065 765 Gene3D - 624 762 - -
Gabi4238g00065 765 Gene3D - 337 477 - -
Gabi4238g00065 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Gabi4238g00065 765 ProSiteProfiles Serine proteases, subtilase domain profile. 109 607 - -
Gabi4238g00065 765 CDD PA_subtilisin_like 344 470 - -
Gabi4238g00065 765 CDD Peptidases_S8_3 104 574 IPR034197 -
Gabi4238g00065 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 60 760 IPR045051 -
Gabi4238g00065 765 Gene3D Peptidase S8/S53 domain 133 620 IPR036852 GO:0004252|GO:0006508
Gabi4238g00065 765 Pfam Subtilase family 131 580 IPR000209 GO:0006508|GO:0008236
Gabi4238g00065 765 Pfam Fibronectin type-III domain 656 760 IPR041469 -
Gabi4238g00065 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4238g00065 Gabi-Chr4238 551644 553950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4238g00065 1 764 Subtilisin-like Serine Gene Family AT1G04110 66.366 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4238g00065 - - gmx:100790205 1340.48