Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4238g00031 ATGGGGAGGAGTAAGGTTAGGCAGGGGAGGAGATTGCAGAAGATAATGAAGTGCTTGTGTTCGGGGGAGCAGTTAAGAGCAGCAGATGAAATGGTTCCTTGGTCGGAATCTGTTGCATCGAAGGATTATTATTCGGCAAATTCTGGCCGTGATGGACAAGTTGTGAGGAGGAGGCCGGATACAGGCAACATAGAAGAAGCTGAATCGTCCTTACGTGAGAGTGGCATCTTGAACTATGAGGAAGCTAGAGCTTTGTTAGGAAGATATGAATATCAGGAAGGAAATATAGAATCCGCTTTACATGTTTTTGAGGGAATAGATATAGGCGCAGTGACTCCCAAGATAAAAATTTCCCTTGCCAAAAGAAGAGAACGCCGTAAGAGACATCCCCAGAATCATACTACTCCACCAATGTCTATACATACTGCTGGATTACTGTTGGAAGCAGTTTTCCTTAAAGCAAAATGCTTGCAGGCTCTTGGGAGGTTTAAAGAAGCTGCCCAAACTTGCAAAGTTATTTTGGACATAGTTGAGTCTTCATTACCTGAAGGCTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTTTGAGTAAGGCAGTTGAGCTACTTCCAGAATTATGGAAACTTGCTGATTGTCCCCGTGAAGTTATTTTATCTTATCGGCATGCGCTCCTTCCTCAGTGGAATCTTGATTCAGAGACCAAAGCAAAGATACAGAAAGAATTTGTTATTTTTCTTCTATATAGCGGAGGGGAAGTAATCCCCCCAAATCTTCGTTCTCATATGGACAGCTCATTTGTACCCACAAACAACATAGAGGAGGCTATACTTCTTTTAATGATTTTGCTAAGAGAAGTCTCTCTAAATAAAATTGAATGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTATCTGTTTCAGGGGATTTGACAGCTTTAGCCAGTCAATGGGAAGAATTGCTTCCTGGGACTATCAATCGAAGAGAAAGATACCATGCCCTTGCTCTTTGTTATTATGGGGCAGGTAAGGACTTGGCAGCACTGAATCTTCTTCTAAAATTGTTGAGTAGCAGAGAGGACCCGAAACATGTTCCTGCTTTGTTAATGGCTTCTAAGATTTGTTGCGAGAACCCTGATCTTGCAAAAGATGGGGTAAGCTTTGCTCGCAGAATGCTTGATAACTTGGATGGAAGATGTGATCAGTTCGAAAGTCTTGCCAATTGCTTACTTGGTGTTTCACTTTCAGCACACTCAAAATTGGCTATTTCTGATTCTGAGAGGTTTGAGAGACAGTCCGAGGCACTTCATTTCCTGGAAACTGCGGTCAGAATGACCAGAATGTGTGAACCCCTTTTACTGTACCATTTCAGTTTAGAATGTGCAGAGCAAAGGAAGTTGGATGCTGCACTTCATTACGCCGAATGCTTTCTAAACTTGGAAGTTGGATCTAATGTTAAAGGGTGGTTATTGTTAGCCCGGATATTATCAGCTCAAAAGCAGTTTTTGGATGCTGAATCCATTGTCAATGCTGCTTTGGATCAAACTGGAATATGGGACCAAGGAGATTTGTTACGGACAAAAGCTAAACTGCAAACTGCACAGGGCCAGTTAACGAGTGCCATTGAAACATATAGTCAGCTACTTGCTATTCTTCTAGTTCAGAGAAAAGCTTTTGGTTCAAGGAAGAAGCTATACAAGGACTACAGAGATCATGCTAGGAACTTGGAAGTGGAAATTTGGCATGATCTTGCTTATGTATACATAAGTCTGTCACAGTGGCATGATGCAGAGGTACAATGTACGAAGCAAAGGGCCTTTACAAAGAGGCTCTAA 1845 0.4201 MGRSKVRQGRRLQKIMKCLCSGEQLRAADEMVPWSESVASKDYYSANSGRDGQVVRRRPDTGNIEEAESSLRESGILNYEEARALLGRYEYQEGNIESALHVFEGIDIGAVTPKIKISLAKRRERRKRHPQNHTTPPMSIHTAGLLLEAVFLKAKCLQALGRFKEAAQTCKVILDIVESSLPEGLPENFGAECKLQETLSKAVELLPELWKLADCPREVILSYRHALLPQWNLDSETKAKIQKEFVIFLLYSGGEVIPPNLRSHMDSSFVPTNNIEEAILLLMILLREVSLNKIEWDPSILDHLSFALSVSGDLTALASQWEELLPGTINRRERYHALALCYYGAGKDLAALNLLLKLLSSREDPKHVPALLMASKICCENPDLAKDGVSFARRMLDNLDGRCDQFESLANCLLGVSLSAHSKLAISDSERFERQSEALHFLETAVRMTRMCEPLLLYHFSLECAEQRKLDAALHYAECFLNLEVGSNVKGWLLLARILSAQKQFLDAESIVNAALDQTGIWDQGDLLRTKAKLQTAQGQLTSAIETYSQLLAILLVQRKAFGSRKKLYKDYRDHARNLEVEIWHDLAYVYISLSQWHDAEVQCTKQRAFTKRL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4238g00031 614 Gene3D Tetratricopeptide repeat domain 430 609 IPR011990 GO:0005515
Gabi4238g00031 614 Gene3D Tetratricopeptide repeat domain 53 414 IPR011990 GO:0005515
Gabi4238g00031 614 PANTHER PROTEIN NPG1 16 610 IPR043376 -
Gabi4238g00031 614 SUPERFAMILY TPR-like 147 364 IPR011990 GO:0005515
Gabi4238g00031 614 SUPERFAMILY TPR-like 433 606 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4238g00031 Gabi-Chr4238 233460 240812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4238g00031 10 608 Calmodulin-binding Proteins AT4G28600 55.810 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4238g00031 K21843 - gmx:100784353 898.271