Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4236g00048 ATGGTTAGTGTTCAATCTTGTTACACTGTCACACCCTCTGAACCCACCCCAAATGAAAAACTATACTCCTTGTGTGAACAAATCAAGCTTCGCACCCATGCTCCTCTCCTTTTTGTGTACAAGCCACATGGCCATGAAAAAGCATCAACCTTTGTTCACATCCTGAGGACCTCTCTAAGCAAAGCTTTGGTTATTTATTATCCACTTGCAGGGAGGTTGAGTTGGATTGAAGGAGGACAATGGGAAATCCATTGCAATGGCAAGGGAGCGTGGTTATTGGAAGCCAATTGTGACGAAGTGAAGAACTTGGATGATTTGGGTGATTTTGTGCCAACCAATTTGGTGTCAAAGCTTATGCCAAACATTGATTATGGTGTTCCCATTGAGGAGGTTCCTCTGCTAGTGGTGCAACTAACAAGATTCCAATGTGGTGGTCTTGTCATAGGTGTTGCCTTGTGTCGTGCTGTAATTGATGGAATAGCAACCATGCATTTCATGAGAACATGGGCCATGTTAGCAAGAGGAGAGAATGTGGACCTAAAAGAAATGCCATGCCATGATAGAACTTTGCTAGATTCACAAAAGCTTCATATGGGGTTGCATGAACATCTTGAGTTTCACCCTCCTCCTCCTTGGGTAGGTGAATTGGGAGACACAAGGGTAGTAGTAGTTGATATTGTGAAACTCACACAAGAACAAGTTGAGAAGCTCAAGAAGAAGGTAAATAGTGCCTATGGTGCTAGTGCTGCAGCACCAAGACCTTGTTCAACTTTTGAAGTAATTGCAGGGCACTTGTGGAGGTGTGTTAGTAAAGCACGCTATGAGGGAAATGGTGACCAACACACAAGGTTGTCAACATTGGTTAACTGTAGAAACAGGTTGAGGCCACCCTTTCTTGATTGTTATGCAGGGAATGCAGCATTTCCTACAGTGACACCAACATGCTCCTTTGATGACCTTATGCAAAAGCCTTTGAGTTATGCAGCTTGGAATGTTAGGAAAGCACTTGAAAGGGTGACAGGGGAGTTTGTAAGGTCAGCACTTGGTCATATAGAAAATCAAAAGGATATGAATATGGTGAGGAATAATTTTCACTACCCTGCAACAAGTGTACATGAAGGACCATTCAAGGGGAACCCGAACCTTTTTGTTGTGAGTTGGATGAATTTCCCGTTTGAGGATGCAGATTTTGGGTGGGGAAAACCTGTTTATTTTGGCCCAGGATTTATGGATTCCGAAGGGAAGGCCTTCATTTTCAATAATGCTAATGGTAATGGGGTCATTGTGGCTATTTCTTTGGATTCATCTCACATGGATTCTTTCAAGAAATTGTTTTATGATGATATCGAAGAGGTGTTTACTCTTTCCAAATTGTGA 1377 0.4248 MVSVQSCYTVTPSEPTPNEKLYSLCEQIKLRTHAPLLFVYKPHGHEKASTFVHILRTSLSKALVIYYPLAGRLSWIEGGQWEIHCNGKGAWLLEANCDEVKNLDDLGDFVPTNLVSKLMPNIDYGVPIEEVPLLVVQLTRFQCGGLVIGVALCRAVIDGIATMHFMRTWAMLARGENVDLKEMPCHDRTLLDSQKLHMGLHEHLEFHPPPPWVGELGDTRVVVVDIVKLTQEQVEKLKKKVNSAYGASAAAPRPCSTFEVIAGHLWRCVSKARYEGNGDQHTRLSTLVNCRNRLRPPFLDCYAGNAAFPTVTPTCSFDDLMQKPLSYAAWNVRKALERVTGEFVRSALGHIENQKDMNMVRNNFHYPATSVHEGPFKGNPNLFVVSWMNFPFEDADFGWGKPVYFGPGFMDSEGKAFIFNNANGNGVIVAISLDSSHMDSFKKLFYDDIEEVFTLSKL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4236g00048 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 446 - -
Gabi4236g00048 458 Gene3D - 1 208 IPR023213 -
Gabi4236g00048 458 Gene3D - 218 448 IPR023213 -
Gabi4236g00048 458 Pfam Transferase family 1 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4236g00048 Gabi-Chr4236 621234 622610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4236g00048 2 447 Monolignol Biosynthesis Gene Families AT5G48930 36.703 1.05e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4236g00048 K13065 - gmx:100775549 638.262