Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4236g00044 ATGATTTCCTCAGATGACCAACATGACTTTTCCATTTACGTATATCCCAACAAAACAGAGAAGGTCTGTTTCAATAGGCCTATAACCGACGGTTCCAACCTTTGGCTTGAAAGTTCCGCAGAAACAACACTACCTCAATTTGTTCTACAATTTGCTATTATATTAACACTCAATCGCATTCTCCTTGCTGCTGCAGCATCATGCCATCTACCACGTATTGTTGCCAATATTTTTACTGGTTTTTTATTAGGTCAATCTGTGATGGGAGGTTGGCATTTTTATGACAAGCACATATTTCCTTTTACTAATATGTTGCCATTGGAGACTTTGGGAGCGATGGCACTTGTTTATTATGTGTTCTTGCTTGGCTTGGAGATAGACCTCAAACATATAAAGAGGTGTCACAGTAATAAGAAGGCCACGGTTGTTGCAATTGCTGGTATAATCTTCACTTTACCTGTTGGTGGTGGCTTGTACTATCTTCTTGTCACAGACATGGGGCGCAATGCTTTGTCTCCTTCAGACAAAGTTAAACACATAAGGGGTGCAATAATATGGGGAATCACCCTTTCTTGCTGTGGTGATTTTCCTGAAATTGCTTCAATTCTTTCACACCTAAAGCTACTTCTCACAGAGAATGGACAACTTGCTCTAGCTGCTTCAACGATTAATGACTTGTATTCTTGGACCTTGATTGTGTTGACTATAACAGAATTCTATTACCATTCTGTATCATCAATGATCTTCGCCCTCATGTTTTTGTTGACATGTTTTTTTTTTATTCATCCTATTGCTAAGTGGCTTTTCAACATGGCTGGGACAAGGGATCGCGAGTTTCTTGAGTCCCAAGTAGTGTTTCTCCTCCATTTTGTTTTGGCCGTTGGACTACTAGCTGATGGGTTGGGTGCACATTCCATCACAGGCGCTTTCCTTTTAGGAGTTGTGCTCCCAAAGGGTGTGGTTAACAATGCAGTTCAGGACAAGGTGCTTGATTTTGTGGCTGCTTTCATGATGCCACTCTTCTTTGTTGCTATTGGTGAGAGAATGAAAATCCAAGTGTTGGCGTTGGACTCACACTGGACAACCGTGGTGATTGTTATTGTGCTGGCTTTCATTGCGAAGATATTGTGCACTTTTGTGGTCTCTTGTATCTACCAGATGCCAATCATGGAAGGATTATCGCTTTCACTGCTCATGAATACTAAAGGAATGATGTCATTGATCATTCTTAGCACTGCCAGGGACAGGCTCGAACTGGACCACCAAACCTATGGGGTGATGCTAGTGGCGTGCTGGTTCATGACTGTTGCTGTAGGACCTGTCTTGGCTGCTGCCAGGAACCCCATCACCACGAGCTACTGGTTCGGGAGCCAATCCAAGACCATACAAGGCACAAGGCAAGACTCACCGCTAAAAGTGTTGGCCTGTGTTCACACAAAACGCGATGCCAATGTCATCATCAACCTCTTGAATGCATCATGTCCATCAGTGAAATCTCCAATTGAGGTCATGGCAGTGGAGCTTGTCAAGATGGCTAACCGCCCCACTTCCTCCCTCATTGTAAGGAATGCTCAGAAGCCAGCATCCTTCACCAGCTCCAAATCCACCAAGCCCAATAGCTTCAAGAAAAACGACACCGCCGAGGACGATGACACTCTTGGCTGCTTCGACAACCTTAGAGAATCTATCTTCACCGAAAAGATGAGGGTTGTCTCCTCTTACAACTCCATGCACAAGGACATCTTCAACCTAGCAAGAATTAGTGGGGTGACCTTAATCTTGACCACGTTGTACAAGCAACCAACCTATGATGATTTTGGTGCAGGTCATGCAACTGCCAGAGCTGTCAACATCATAAACAGGGACAATTCAAGCAGAGACAAAAAGAAAGTGGTGTTGGAGCATTTGGTGAAGGAGACACCATGCTGTTTAGCCATATTTGTGGACAGAGGGTTCGGTCAGAAACGTGCCAAAGAGCAAAGACTAGCAATGTTCTATGTAGGTGGTGCTGATGACCGTGAAGCTCTTTCTTACGCTTGGAGGATGAGTAGGAACCAGGAGGTTCAGTTAACGGTGGTGCGGCTTGTTTGGGACAACCCTGAAGATGAGTTTGATGAAATGGACAAGGAGTACATAAACGAGTTCGTGCAACAAACGGTAGACACACCTAGGCTGAAGTATTTGGAAAAGGTGGTGAAGGATGAGAAGGAAACGGTGATGCTTTTGAACAAGATGGGGAACAAAGGGTTTGATTTGTACATTGTTGGGAGAGGACATGGGAGGAAGATGTCGTTGGCACAAACGTTGGAACCTGTGTTGGAGGAACCTGCTTTGGGTCCTCTTGGTGATGCTTTGTCGGATTTGAACTCTGCTGCAAAGACTTCAATTTTGATCTTACAAAGACAACCTGATCTTGGTGATGATCATAGTTCTAGGAAACATGTGCACTCTTCATCTGGACAATTTTTAGATATCATGCTTGATCAGCACACTGTATAA 2499 0.4406 MISSDDQHDFSIYVYPNKTEKVCFNRPITDGSNLWLESSAETTLPQFVLQFAIILTLNRILLAAAASCHLPRIVANIFTGFLLGQSVMGGWHFYDKHIFPFTNMLPLETLGAMALVYYVFLLGLEIDLKHIKRCHSNKKATVVAIAGIIFTLPVGGGLYYLLVTDMGRNALSPSDKVKHIRGAIIWGITLSCCGDFPEIASILSHLKLLLTENGQLALAASTINDLYSWTLIVLTITEFYYHSVSSMIFALMFLLTCFFFIHPIAKWLFNMAGTRDREFLESQVVFLLHFVLAVGLLADGLGAHSITGAFLLGVVLPKGVVNNAVQDKVLDFVAAFMMPLFFVAIGERMKIQVLALDSHWTTVVIVIVLAFIAKILCTFVVSCIYQMPIMEGLSLSLLMNTKGMMSLIILSTARDRLELDHQTYGVMLVACWFMTVAVGPVLAAARNPITTSYWFGSQSKTIQGTRQDSPLKVLACVHTKRDANVIINLLNASCPSVKSPIEVMAVELVKMANRPTSSLIVRNAQKPASFTSSKSTKPNSFKKNDTAEDDDTLGCFDNLRESIFTEKMRVVSSYNSMHKDIFNLARISGVTLILTTLYKQPTYDDFGAGHATARAVNIINRDNSSRDKKKVVLEHLVKETPCCLAIFVDRGFGQKRAKEQRLAMFYVGGADDREALSYAWRMSRNQEVQLTVVRLVWDNPEDEFDEMDKEYINEFVQQTVDTPRLKYLEKVVKDEKETVMLLNKMGNKGFDLYIVGRGHGRKMSLAQTLEPVLEEPALGPLGDALSDLNSAAKTSILILQRQPDLGDDHSSRKHVHSSSGQFLDIMLDQHTV 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4236g00044 832 Gene3D - 45 449 IPR038770 -
Gabi4236g00044 832 PANTHER CATION/H + ANTIPORTER 37 802 - -
Gabi4236g00044 832 Pfam Sodium/hydrogen exchanger family 63 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4236g00044 Gabi-Chr4236 576085 579590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4236g00044 71 818 Antiporter Super Family AT2G13620 31.392 3.07e-127 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4236g00044 K26731 - vvo:131609937 1041.57