Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4236g00043 ATGGTTAAGATCCATAGTTCTTACCCTGTGATCCCTTCAGAATCCACACCAACACCAAATCTATCTCTATCACAGTGCGATCAAATCAAGCTTCCCACTCACGGATCTCAACTTTATGTTTACACCAACAACAACACCTGCAACATCAGTGATGATTCACCTCTCAGAACAATCAGAACCTCTCTCAGCAAAGCACTGACTCACTACTACCCCATGGCTGGTCGTTTGTGCTGGATCCAAGGTGGTCGCTTGCAACTCCTTTGCAACACTAAAGGGGCACTTTTCTTTGAAGCCACTTGTGATGATGAGGTCAGTTTAAATGATTCTGGTGATTTTGTTCCCACCCATGTTGTTGAACAACTTGTGCCAAAGGTTGACTATGGTGTCCCAATTGAGGACATACCCTTGTTGTTGGTTCAGTTGACTATGTTCCCATGTGGTGGATTCACTCTAGGACTTGCCTTATGTCGTGCTGTGCTTGATGGAGCTTCTGTTGGGAGTTTCATCAACTCATGGGCCAAACTAGCCAGAAAAGAGAGTTTAGATTCCAGCTTAATCCCATTGCTTGATAGAACTCTGTTAGATTCAAGAAAACTTAATATGTCTCCACGTTTTGAACATCATGAGTTTTTCCCACCACCCCTTTGGGCAGGTATGTTAAAAAACACCAAGATGAGACTTTATCCTACTACTACCACTGCCATGTTGAAACTCACCAAAGGCCAAGTTGAGAAACTGAAGAAAGCATGTGACTTTACTCAAGTGAAACCTTATACTAGTTTTGAGGTCATTAGTGGTCACTTGTGGAGATGTGTTTGTAAAGTTAGGTATGAAGGGAATTGGGACCAGCCAACAAGGTTAACCACATTGGTCAATTGTAGAAACAGATTGAACCCACCTCTCCCTCATGCTTATTTTGGGAATGCAACATTTCCTACCGTGACACCAACTTGTTCATTTGATGACATTGTGCACAAGCCTCTGAGTTATGTAGTTGGGAAAGTGAGGGTAGCAATTGAGAGGATGAGTGATGAGTATGTGAGGTCTTCTCTTGACTATATGGCAAATCAGAAGGACTTGAATTTGTTTAGGGACATATTTTACAACTCTGCAGGAAGTGTGGGAGGACAATTCAGTGGTGACCCGAATCTTTATGTTGTTGGTTGGACGAATTTTCCATTTTATTCAACTGATTTTGGGTTGGGAAAACCTGCTTATATGGTTCCGGGGAACATAAATTCTGAGGGTAAGGCTTTCCTTTTGAACAATGGAAATGGTGATGGTTTCATTGTAGCTGTATGTTTGCAACCATCCCATATAGATGCTCTGAAGAAGTTGTTTTATGAGGGTATGGAACCTAGTTCCAAATTGTGA 1374 0.4199 MVKIHSSYPVIPSESTPTPNLSLSQCDQIKLPTHGSQLYVYTNNNTCNISDDSPLRTIRTSLSKALTHYYPMAGRLCWIQGGRLQLLCNTKGALFFEATCDDEVSLNDSGDFVPTHVVEQLVPKVDYGVPIEDIPLLLVQLTMFPCGGFTLGLALCRAVLDGASVGSFINSWAKLARKESLDSSLIPLLDRTLLDSRKLNMSPRFEHHEFFPPPLWAGMLKNTKMRLYPTTTTAMLKLTKGQVEKLKKACDFTQVKPYTSFEVISGHLWRCVCKVRYEGNWDQPTRLTTLVNCRNRLNPPLPHAYFGNATFPTVTPTCSFDDIVHKPLSYVVGKVRVAIERMSDEYVRSSLDYMANQKDLNLFRDIFYNSAGSVGGQFSGDPNLYVVGWTNFPFYSTDFGLGKPAYMVPGNINSEGKAFLLNNGNGDGFIVAVCLQPSHIDALKKLFYEGMEPSSKL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4236g00043 457 Gene3D - 220 449 IPR023213 -
Gabi4236g00043 457 Pfam Transferase family 1 448 - -
Gabi4236g00043 457 Gene3D - 1 212 IPR023213 -
Gabi4236g00043 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4236g00043 Gabi-Chr4236 545469 546905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4236g00043 2 449 Monolignol Biosynthesis Gene Families AT5G48930 37.719 1.95e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4236g00043 K13065 - gmx:100819383 568.54