Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4236g00042 ATGGTAAGTGTGGAGCGTTTTCACAGAGTGATTCCCTGTGAACCCACGCCCGGTGGAAAGCTCTCCTTGTCGAGCTTCGACCAATACAGACTCTACACACATATTCCTCTCCTTCACATCTACAGATCCAAATCCATTCATCATCATCATGATGATGCCTCTGTCACTCTCATGGAAACTCTCACCAACTCTCTCAGTAAAGCATTGGTTCACTACTATCCACTCGCTGGCCGCTTATGTGCAATCCATGGTGGCCGCTGGGAACTCAACTGCAACTCCATGGGAGTACACCTCTTTGAAGCACATTACCAACCAACAACAACAAAAACAACAACTTTGGATGATTTTGCTCTAACCCAATTGCTGCAACAACAACTCATGCCCAAGATTCCTTATAATCCCCCAATAGAGGATATGCCTCTGTTGGTGATACAACTCACTAGTTTCCCTTGTGGTGGACTCACTCTTGGGGTGGCCATATCTCGTGTTGTGCTTGATGGGGTTGGTTTCATGGTTTTCCTCAACTCTTGGGCCAAATTGGCTAGGGGAGAGAATCTAGATCCTTCTGAGATACCATGTTATGATAGAGCTTTATTGAACTTAAGCAGGGTCCACATCTTGCAGCGTTTTCAATTTCATCACCCGGAGTTTCAACCACCACCCCTTTGGGTAGGTAGCTTCTTGGTAGATGACACCAAGTATGACACTATTATTGAGGTTTTCAAACTCACCAAAGCCCAAGTTCAGAAGCTTAAGGAGAGAGTCCTTATTGACTTTGGCAATGGAAATTCTCCACAGCAAAATTGTACAAGTTTTGAGGTTATTTCTGGGCTCCTATGGAGGTGTGTCTGCAAGGCACGTTTTGCTGGCAATGGTGACCAACCAACAAGAGTGTCCACCTTGGTTCATTGTAGGAACCGGTTGAAGCCACCCGTGCCAAATTCTTATTTTGGGAATGTAGTTCTTCCAACTGTGACAAGAACCTGCACCTTTGATGATGTCATTTACAAGCCTTTGAGTTATGCTGTTGGGAACATAAGAGAAGCTTTACGGAGGTTGACTGATGAGTATATAAGGTCTGCTCTTCAATATATAGCTGATCAGAAGGATGTGAGTGTGGTGAGAAATAATGTTAACTTCAATGTAGCAAGTGCTGGAGGACAATTTAGGGGAAACCCAAGTCTATCTATTGTTAGTTGGATGAATTTTCCTTTTCAGGATGCGGATTTTGGGTGGGGAAAACCTGTTTATCTACTTCCAGGGAACATAAATTCTGAAGGGAAGGCCTTTATTATGAATAATGGTAATGGTGATGCTGATGGTGAATGTATCATTGTAGCTATTTGCTTGCTTGCATCCAATATGGATGCTTTCAAGAAGTTCTTTTACGAGGATGTAGCAGAGGTACTTAGTTCTTCCAAGCTGTGA 1428 0.4349 MVSVERFHRVIPCEPTPGGKLSLSSFDQYRLYTHIPLLHIYRSKSIHHHHDDASVTLMETLTNSLSKALVHYYPLAGRLCAIHGGRWELNCNSMGVHLFEAHYQPTTTKTTTLDDFALTQLLQQQLMPKIPYNPPIEDMPLLVIQLTSFPCGGLTLGVAISRVVLDGVGFMVFLNSWAKLARGENLDPSEIPCYDRALLNLSRVHILQRFQFHHPEFQPPPLWVGSFLVDDTKYDTIIEVFKLTKAQVQKLKERVLIDFGNGNSPQQNCTSFEVISGLLWRCVCKARFAGNGDQPTRVSTLVHCRNRLKPPVPNSYFGNVVLPTVTRTCTFDDVIYKPLSYAVGNIREALRRLTDEYIRSALQYIADQKDVSVVRNNVNFNVASAGGQFRGNPSLSIVSWMNFPFQDADFGWGKPVYLLPGNINSEGKAFIMNNGNGDADGECIIVAICLLASNMDAFKKFFYEDVAEVLSSSKL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4236g00042 475 Gene3D - 229 464 IPR023213 -
Gabi4236g00042 475 Gene3D - 1 219 IPR023213 -
Gabi4236g00042 475 SUPERFAMILY CoA-dependent acyltransferases 264 321 - -
Gabi4236g00042 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 462 - -
Gabi4236g00042 475 Pfam Transferase family 2 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4236g00042 Gabi-Chr4236 537509 540323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4236g00042 10 464 Monolignol Biosynthesis Gene Families AT5G48930 36.245 4.23e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4236g00042 K13065 - qsa:O6P43_006188 465.692