Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4226g00002 ATGACACCTAATTTTCTCATTTCAAGATTAATTGCTTCATCATTCACATACTGCAAGACTACCCAAACTCATTTGGGTTCTCTGCTTCAACACAATGCTTTCCTTTCTTTCTTCGTCACTTCACGCACCTCTTCTGATTGTGAATCAGATAGAAACCATCACAAAGGTGACACCTTTACCATATCTTACCTCATAAACTCATGTGGGTTGTCCCCACATTTGGCTAAGAAGCTCTCCAAAAGAGTGAATTTGAAAAACCCAGATGGCCCAAATGTTGTTCTTGATCTTCTCAGGAACTATGGGTTCTCTAAAGCTCAGATTGCAAAACTTGTGGAGAAACATCCATTGGTGCTTGTTGCAAGAGTACAGACTACCCTTTTGCCTAAACTCAAATTCTTCTGTTCTATTGGGGTTTCCACCAGAGACATGCCAAAGATCCTAATTGCTAACTACCTTCTCTTGGCGAGGAGCTTGGAGAATTGCCTTATCCCTCGTTATGAGACTCTCAGAAGTGTGATTAGTGATGATCAGGAAGTTGTTAGAGCTTTGAAAAATTCCCGAATTAATTTTATAGCTTCTGACATAATGAATGATTTGATTCCAAACATTAAGGTTTTGAGACAATGCAGTGTGCCACAAGCTTCCATCTCTCTGCTTATGGTCAATTTTCCAAGTGCAGCATATGCAAAGCATTCCAAATTTGTGGAAGCTGTCAAGACAGTTAAGGAAATTGGGTGTAATCCTTTGCAAACAACTTTTGTCATGGCTGTCCAAGTGATTTTAGGTATGAGAAAAGCAACGTGGGAATCGAGATTTGAGGTTTATGAGAGATGGGGCTGGAACCGTGAAATGACTCTTGGAGCATTTAGAAAATTTCCCAATTTTATGAAGTTGTCAGAGGAGACATTTTCGCAAAAAATGAGTTTCCTAGTGAAGGATATGGGTTGTCCATCAGAAGATGTTGCTGACTATCCTCCGGTTCTTGCCTACAGCTTGGAGAAAAGGATCACTCCCAGATTCTCAGTAATTAAAATCTTGAAATCAAAAGGTTTGGTTGAGAGTAATTTGCATTTCAGCTCCTTTATGTGCCCAACTGAGGAAAATTTTATGAAGAAATTTGTTATCAATTTTCGGGAAGATGAGCCTCTCCTACTAGATGTCTACAAAGGTTTTATTGATCATCAGAATGTAATATAG 1197 0.391 MTPNFLISRLIASSFTYCKTTQTHLGSLLQHNAFLSFFVTSRTSSDCESDRNHHKGDTFTISYLINSCGLSPHLAKKLSKRVNLKNPDGPNVVLDLLRNYGFSKAQIAKLVEKHPLVLVARVQTTLLPKLKFFCSIGVSTRDMPKILIANYLLLARSLENCLIPRYETLRSVISDDQEVVRALKNSRINFIASDIMNDLIPNIKVLRQCSVPQASISLLMVNFPSAAYAKHSKFVEAVKTVKEIGCNPLQTTFVMAVQVILGMRKATWESRFEVYERWGWNREMTLGAFRKFPNFMKLSEETFSQKMSFLVKDMGCPSEDVADYPPVLAYSLEKRITPRFSVIKILKSKGLVESNLHFSSFMCPTEENFMKKFVINFREDEPLLLDVYKGFIDHQNVI 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4226g00002 398 Pfam mTERF 94 306 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 Pfam mTERF 261 369 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 PANTHER CGI-12 PROTEIN-RELATED 58 376 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 FunFam Mitochondrial transcription termination factor-like 158 380 - -
Gabi4226g00002 398 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 SMART mt_12 144 176 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Gabi4226g00002 398 Gene3D Transcription termination factor 3, mitochondrial 173 379 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4226g00002 Gabi-Chr4226 40675 41988 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi4226g00002 mTERF 1.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4226g00002 K15031 - gmx:100786641 528.48