Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4225g00002 ATGGTGATTGTGAACATTGGGAAGAAGAACGAGAAGGAGGTAACTCGACTTGGGAAATATGAGTTGGGTAGGACTCTTGGTGAAGGCAATTTTGGTAAAGTCAAGTTTGCTAGGAACACAGAATCTGGCCAACCTTTTGCCATTAAGATCATTGAGAAGAACAAGATCATCGATCTCAATATCACTGATCAGATAAAGAGGGAAATAGCCACCTTAAAGCTCCTCAAGCATCCCAATGTTGTTAGATTGTGCGAGGTCTCGGCTAGCAAAACAAAAATTTATATGGTACTTGAGTACGTGACTGGAGGGGAGTTATTTGACAAAATTGCATACAAGGGTAAACTTAACGAAGGTGAAGGTAGAAAGATGTTCCAACAGTTGATTGATGGTGTTAGCTACTGCCACAACAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTGCTTGTGGATGCCAAAGGGAACATAAAGATAACTGATTTTGGCCTTAGTGCTTTACCCCAGCATTTTAGGGCAGATGGATTGCTACATACAACTTGTGGAAGTCCAAACTATGTTGCACCGGAGATTCTTGCTAATAGGGGCTATGACGGTGCAACATCAGATGCATGGTCATGTGGTGTTATCTTGTATGTAATCCTAACAGGATACCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTATCAAAAGATTTTTAAAGGAGATGTTCAGATACCAAAATGGCTATCGCCTGGTGCACAAAACATGATAAAGAGGATTCTTGATCCCAACCCTGTGACCCGGATAACAATGGCTGGGATCAAAGAAGATCCATGGTTCAAGCAGGGCTACACTCCAGCAAATCCTGAGGATGAGGAAGAGGATGTATGTATTGACAATGAAGCCTTGTCCATCCATGAATTGAGGAGTTCAGGATCACCTACCCTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTCTCCGGCTTTTTTGAGACAGAGGATGTCTCTGAGAGGAAGATAAGATTTACATCCAACCTTACAGCTAAAGACCTGATCGAGAGGATTGAGGACAGTGTGACAGAAATGGGGTTTAGAGTCCAGAAGAAAAATGGCAAATTGAAAATGATACAAGAGAACAAGGCGAATAAAACTCTTGGCAGCCTCTCAGTGGCAGTAGAGGTGCTTGAAATAAGACCATCATTATATGTAGTAGAATTAGGGAAGTCTAATGGAGATGCTTCTGTATATAGACAGCTATGCAATAAGTTATTGAATGATTTGGGTGTGCCCCCAAGGCAAGCGGTAGTGAGCTCAGAAGAAGAAGCCAGATAA 1332 0.4189 MVIVNIGKKNEKEVTRLGKYELGRTLGEGNFGKVKFARNTESGQPFAIKIIEKNKIIDLNITDQIKREIATLKLLKHPNVVRLCEVSASKTKIYMVLEYVTGGELFDKIAYKGKLNEGEGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFGLSALPQHFRADGLLHTTCGSPNYVAPEILANRGYDGATSDAWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPKWLSPGAQNMIKRILDPNPVTRITMAGIKEDPWFKQGYTPANPEDEEEDVCIDNEALSIHELRSSGSPTLINAFQLIGMSSCLDLSGFFETEDVSERKIRFTSNLTAKDLIERIEDSVTEMGFRVQKKNGKLKMIQENKANKTLGSLSVAVEVLEIRPSLYVVELGKSNGDASVYRQLCNKLLNDLGVPPRQAVVSSEEEAR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4225g00002 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 412 - -
Gabi4225g00002 443 SUPERFAMILY Protein kinase-like (PK-like) 17 301 IPR011009 -
Gabi4225g00002 443 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Gabi4225g00002 443 FunFam Non-specific serine/threonine protein kinase 309 430 - -
Gabi4225g00002 443 FunFam Non-specific serine/threonine protein kinase 13 312 - -
Gabi4225g00002 443 Gene3D Kinase associated domain 1, KA1 312 429 - -
Gabi4225g00002 443 Gene3D Transferase(Phosphotransferase) domain 1 11 311 - -
Gabi4225g00002 443 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4225g00002 443 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Gabi4225g00002 443 Pfam NAF domain 309 368 IPR004041 GO:0007165
Gabi4225g00002 443 CDD CIPK_C 313 424 - -
Gabi4225g00002 443 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4225g00002 443 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4225g00002 443 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Gabi4225g00002 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4225g00002 Gabi-Chr4225 14753 19815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4225g00002 83 437 CBL-interacting serine-threonine protein kinases AT3G17510 71.271 4.67e-179 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi4225g00002 Pkinase 1.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4225g00002 K07198 - gmx:100777468 727.628