Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4224g00001 ATGGAGTGGCTTCTTCAATTCCTTTATCTCCTCTTTATAACTTCTCTTCTGATCTGTAGTACAGCAATTTCAGATCAAATTCCCAAGCCTTATGTTGTTTATATGGGAAATTCTTCACCCAACAACATTGGGATAGATGGTCAATTATCAGAATCAACTAACCTGCAGCTATTATCATCAATCATTCCAAGAAGAGAAAGTGAGAGGATAACTCTAATCCACCATTTCAGTCATGCCTTTAGTGGGTTCTCAGCCATGCTTACAGAGAGTGAAGCTTCTGCTCTGTCTGGACACGATGGTGTGGTGTCAGTGTTCCCAGATCCAATTCTTCATTTGCACACAACAAGATCTTGGGATTTCTTAGAATCAGATTTGGGAATGAAGCCTCGTGGCACTCCTACACACCTACACTTGTCAAGTGATATCATTATTGGTGTTATTGACACTGGGATATGGCCAGAGTCTCCAAGTTTTAGAGATGACGGCATAGGGAAGATTCCTTCAAGATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATCCAACTGCAATAGAAAACTGATAGGTGCAAGATACTACAATATCCAAGGTACATCAAGTGGCAACCTGACTGATACTGGAGAAAGCAAAGGTTCCCCAAGAGATTCTGTTGGACATGGGACTCACACTGCATCAATAGCAGCTGGTGCCTATGTCAACAATGCTAGTTATTATGGTTTAGCAGAAGGAACAGCAAGAGGTGGCTCACCTTCTACTAGGATTGCTGCCTATAAAACATGCTCAGAAGAAGGTTGCTCTGGTGCCACCATACTAAAGGCTATTGATGATGCTATTAAGGATGGAGTAGATATAATCTCAATCTCTATTGGACTTAGCTCACTATTCCAATCAGACATTTTGAATGATCCCATAGCCATTGGAGCATTTCATGCAGAACAAAACGGGGTCATGGTGGCGTGTTCAGCCGGGAATGATGGTCCTGATCCTTACACAGTTGAGAACACAGCTCCATGGATATTTACAGTTGGAGCTTCTAATATTGATAGGAATTTCCAATCAACTTTAGTCCTTGGAAATGGGAAAACTTTCCTAGGTACAGGCATTAACTTCTCAAACCTTACTCGTTCAAAGATGTATCATATTGTCTTTGGAGAGGAAGTAGCTGCCCAATTTGCCCCTGCATCCGAAGCTAGGAACTGTATTCCTGGATCACTAGATTACAACAAAACTGCAGGCAACATTGTTGTTTGTGTTAATGATGATCCAACTATTTCAAGGAGAATCAAGAAGCTAGTTGTACAAGATGCAAGAGCCATGGGGATGATACTCATTGATGAGGACAACAAAGATGTTTCCTTTGATGCAGGTGTATTTCCCTTCACACAGGTTGGCAATCTTGAAGGGAATCAGATCCTTGAGTACATAAACTCGACCAAGAACCCAACTGCAACAATTCTTCCTACAACCGAAGTTACTAAATATAAGCCTTCGCCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAGGCCTTACAGAAAACATTCTCAAGCCGGATGTCATGGCTCCAGGTATTGGCATTTTAGCTGCCATGATTCCCCAAAGTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCCTTGTTTGCCATAAAATCTGGTACATCTATGGCTTGCCCACATGTGACAGGTGCTGCAGCATTCATTAAATCAGTATATGGAAAATGGAGTCCTTCAATGATCAAATCAGCATTAATGACAACAGCTACAACCTACAATAACATGAGGAAGCCTTTGACCAACAGCTCAAACTACTTTTCCAACCCACATGAAATAGGATTTGGGGAAATTAATCCACTTAGAGCTCTTAACCCTGGTTTAGTTTTTGAAACAGATCTGGAAGACTATCTCAGATTCCTTTGTTTTTCTGGCTCTTCAAAGAAAAACATAAGGTCAATGTTTAAGACCAACTTCAGTTGCCCAAGGAACTCTTCTGATGATCTTATCTCCAACATCAATTACCCATCAATCTCTATAAAAGCACTTAATAGGAAAGGAAAAGGAAAAGTAATCACAAGAACAGTTACCAACGTAGGATCCTTTAATGCCACATATGCTGCCAAGGTGCATGCACCAGAGGGATTGGTTGTCAAGGTCATCCCAAATAAACTCGTGTTTTCTGAGGGTGTTCAAAGAATGTCCTATAAAGTCTCATTTTATGGCAAGGAGGCCCGTGGTGGATACAATTTTGGGTCTCTAAGTTGGTTTGATGGTCGACATTATGTCCATACAGTATTTGCAGTCAAAGTTGAATAG 2325 0.4112 MEWLLQFLYLLFITSLLICSTAISDQIPKPYVVYMGNSSPNNIGIDGQLSESTNLQLLSSIIPRRESERITLIHHFSHAFSGFSAMLTESEASALSGHDGVVSVFPDPILHLHTTRSWDFLESDLGMKPRGTPTHLHLSSDIIIGVIDTGIWPESPSFRDDGIGKIPSRWKGVCMEGHDFKKSNCNRKLIGARYYNIQGTSSGNLTDTGESKGSPRDSVGHGTHTASIAAGAYVNNASYYGLAEGTARGGSPSTRIAAYKTCSEEGCSGATILKAIDDAIKDGVDIISISIGLSSLFQSDILNDPIAIGAFHAEQNGVMVACSAGNDGPDPYTVENTAPWIFTVGASNIDRNFQSTLVLGNGKTFLGTGINFSNLTRSKMYHIVFGEEVAAQFAPASEARNCIPGSLDYNKTAGNIVVCVNDDPTISRRIKKLVVQDARAMGMILIDEDNKDVSFDAGVFPFTQVGNLEGNQILEYINSTKNPTATILPTTEVTKYKPSPIVASFSSRGPSGLTENILKPDVMAPGIGILAAMIPQSDEPGSVPIGKKPSLFAIKSGTSMACPHVTGAAAFIKSVYGKWSPSMIKSALMTTATTYNNMRKPLTNSSNYFSNPHEIGFGEINPLRALNPGLVFETDLEDYLRFLCFSGSSKKNIRSMFKTNFSCPRNSSDDLISNINYPSISIKALNRKGKGKVITRTVTNVGSFNATYAAKVHAPEGLVVKVIPNKLVFSEGVQRMSYKVSFYGKEARGGYNFGSLSWFDGRHYVHTVFAVKVE 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4224g00001 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Gabi4224g00001 774 FunFam Subtilisin-like protease SBT1.5 141 364 - -
Gabi4224g00001 774 ProSiteProfiles Serine proteases, subtilase domain profile. 117 626 - -
Gabi4224g00001 774 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Gabi4224g00001 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 767 IPR045051 -
Gabi4224g00001 774 SUPERFAMILY Subtilisin-like 113 630 IPR036852 GO:0004252|GO:0006508
Gabi4224g00001 774 CDD Peptidases_S8_3 110 593 IPR034197 -
Gabi4224g00001 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Gabi4224g00001 774 Gene3D Peptidase S8/S53 domain 141 639 IPR036852 GO:0004252|GO:0006508
Gabi4224g00001 774 Pfam Fibronectin type-III domain 674 771 IPR041469 -
Gabi4224g00001 774 MobiDBLite consensus disorder prediction 203 221 - -
Gabi4224g00001 774 CDD PA_subtilisin_like 356 487 - -
Gabi4224g00001 774 Gene3D - 350 494 - -
Gabi4224g00001 774 FunFam subtilisin-like protease SBT1.5 350 494 - -
Gabi4224g00001 774 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Gabi4224g00001 774 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Gabi4224g00001 774 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Gabi4224g00001 774 MobiDBLite consensus disorder prediction 203 222 - -
Gabi4224g00001 774 Gene3D - 643 773 - -
Gabi4224g00001 774 Pfam Subtilase family 139 597 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4224g00001 Gabi-Chr4224 50883 60175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4224g00001 31 771 Subtilisin-like Serine Gene Family AT1G20150 43.627 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4224g00001 K25898 - gmx:100781053 1287.71