Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4218g00004 ATGGACCCAATCCAATCGAACGATTTTCAGAAGTACCCACAAACCCTAATCTCAGAGCTTGAAGATTCTGTCATGGAAGATGCAGACGAGTCCTTGTTCGATTCGATGGTTTGTGATTCCAATTCAAGACTCATCCTAACTGGGTTTACGAGATCTGACAACGCAGAGGAGGAGTATTTCATGTTTATAAATGCCGGAGGGGATGCTTTTAATGAAGCAGATGGTGGACTAACGTTCCTGGGTGACACATTTTTTGATGGTGGCAACGCTATGCGTACCGATGAGCAGATAGTGGGGGGTGGAGATTACCCATTTATCTATCAATCAGCTCGGTTGGGAAGTTTTCATTACAGATTTGATAATCTTCCTCCTGGAGACTATGTTGTTGATCTTCATTTTGTGGAGATCATTAATATAAATGGGCCAAAAGGAATGAGGGTATTCAATGTATACATCCAAGAAGAAAAGGTTCTATCTGAATTAGATATCTATGCGGTTGTTGGAGCCAATAAGCCACTGCAGTTGATTGATTCAAGGGTGACTGTGAAGGATGATGGGGTAATTCTCATAAGATTTGAAAGTATAAATGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGGAGAGCAACGAAGGCGTCAGTTCCACAGGTGACAAGCGATTACATTAAATGTAACTACTGTGATGCGCAGATTGAAATTCCTTCCTCACAGATGAAAGTTATGCAGACAAAATCTACTGCAAAGTATGAGAATAAGATAAAGGAGCTCAAAATGCAGTGTGACCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTGCAACGAACGAACAATTGGAATCAGTCCAGATGGAACTTGACAATGTGACATTTAAGTCACTCATTACTGATCAAACTGTGGAGAAACAAGCTGAAAGCCTGAGGTGTATCTCTAGCATGTACGAGCTTGATAAGAAGAAATGGACCGAAGCAATTAGCAGTTTACAGGAAAAAGTAAAGTTGATGAAGAGTGACTGTATTCAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATCCCTGAATTAAACAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAACGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAAGCTAAAGGGAACATTAGGGTTTTCTGTCGTTGTCGTCCACTGAATAGGGTTGAAATCTCAGCTGGGTGTACAACAGTTGTGGATTTTGAAGCAGCAAAGGATGGATGCCTTGGAATTTTGACAAGTGGCTCCGCCAAAAAATCTTTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCCTCATCGATGGTAGTATCTGTGTTGGATGGCTACAATGTTTGCATCTTTGCTTACGGGCAAACAGGAACAGGAAAGACATTCACCATGGAAGGAACAGAGCAGAATAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGCTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGGCAAACATCAAAAAGGTTGGAGATAAAACAAGTCTCTGAAGGATCTCATCATGTTCCTGGTGTAGTAGAAGCCAAGGTTGATAACATAAATGAAGTGTGGAATGTACTGCAGGCCGGAAGTAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAACATAGCAGTCGATCTCACTGCATGCTTTGTATAATGGTAAGGGCTAAAAATTTGATGAATGGTGAATGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTAGCAAAGACTGAAGCGCAAGGGGAGCGGCTGAAGGAAGCACAAAATATCAATCGATCTCTTTCAGCTCTTGGAGATGTGATATCCGCTTTAGCAGCCAAAAGTAGTCACATTCCATACAGGAACTCTAAATTGACACATTTACTTCAAGACTCGCTAGGAGGTGATTCCAAAACTTTGATGCTTGTACAAATAAGTCCATCAGACCAGGACTTGGGTGAGACTCTGAGCTCGCTTAATTTTGCAACTAGAGTGAGGGGGGTCGAGTTAGGTCCAGTTAAGAAGCAAATTGATACAAGTGAAATTCAAAAGATGAAAGCAATGCTTGAAAAAGCCCGGAGTGAGTGCAGAATTAAAGATGAATCTATGCGGAAACTAGAAGAAAATTTGCAAAGCATGGACAGTAAGGCCAAAAGCAAGGATCTTATTTACAAGAATCTACAAGAAAAGATTAAAGAACTCGAAGGCCAGATTGAGTTGAAGACAGCCATGCAAAACCAGTCAGAAAAACAAATTTCTCAGTTATCTGACAAATTGAAGGGAAAAGAAGAAACCTGCTGTACTCTCCAACATAAGGTCAAAGAGCTAGAGAAAAAGCTGAAAGAACAACTACAGTCAGAGACAGCAAGTTTTCAACAAAAGGTTTGGGATCTAGAAAAGAAGCTGAAAGATCAAATGCAAGGGTCAGAGAATGAATCTGCCATTCTAAAAGATAAGGTCAAGGAGCTCGAGAGAAAACTGAAAGAGCAGGAACAGAACTCAGAATCCTTGCTTCAACAGATGAAGGAACTAGAGGAAAGGTACAGAGAGCGAGAGCAACAGTGGCAACAAACTCATTGTTCTGTTGATGCAGTAAAGGCAACACCTGACGTAGTAGGTAAAAGCTGCAAAAGTGATGAATGTCCAAGTGAGAATGAGGCTCGCATTTTAAGGTGTTCAAACACAGTAAACCGCCAGATAAGTCAAGGTTCTATTTTGTTCAAAGGGAATGATTCTACTCAGCAGATAAGAAGCAAAAGAGAGTTCAGAAGCAATGAAACAGAGAACAACTTTGTCATGTCATCATCATCTACTTTACATGATAGAAGAAGAGTCACAAGGAAATCTGATCCACCTAAAATAGTAAAGGTTGGAAGGCCAACTACGAAGCCAGTCATTGCTACTCAAGCTCCATTGTCTCACAAGAGAGCTAGCACAAGCAGAGATAATGTTCAAGGAATTAGAGAAAGGGATAGTAAGAAGAAAATTTGGTCAAGATAG 3159 0.4033 MDPIQSNDFQKYPQTLISELEDSVMEDADESLFDSMVCDSNSRLILTGFTRSDNAEEEYFMFINAGGDAFNEADGGLTFLGDTFFDGGNAMRTDEQIVGGGDYPFIYQSARLGSFHYRFDNLPPGDYVVDLHFVEIININGPKGMRVFNVYIQEEKVLSELDIYAVVGANKPLQLIDSRVTVKDDGVILIRFESINGSPVVSGICIRRATKASVPQVTSDYIKCNYCDAQIEIPSSQMKVMQTKSTAKYENKIKELKMQCDLKAKECYEAWMSLTATNEQLESVQMELDNVTFKSLITDQTVEKQAESLRCISSMYELDKKKWTEAISSLQEKVKLMKSDCIQLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYNEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNRVEISAGCTTVVDFEAAKDGCLGILTSGSAKKSFRFDRVYTPKDDQVDVFADASSMVVSVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKVSKERSETFSYDISVSVLEVYNEQIRDLLATGQTSKRLEIKQVSEGSHHVPGVVEAKVDNINEVWNVLQAGSNARAVGSNNVNEHSSRSHCMLCIMVRAKNLMNGECTKSKLWLVDLAGSERLAKTEAQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMLVQISPSDQDLGETLSSLNFATRVRGVELGPVKKQIDTSEIQKMKAMLEKARSECRIKDESMRKLEENLQSMDSKAKSKDLIYKNLQEKIKELEGQIELKTAMQNQSEKQISQLSDKLKGKEETCCTLQHKVKELEKKLKEQLQSETASFQQKVWDLEKKLKDQMQGSENESAILKDKVKELERKLKEQEQNSESLLQQMKELEERYREREQQWQQTHCSVDAVKATPDVVGKSCKSDECPSENEARILRCSNTVNRQISQGSILFKGNDSTQQIRSKREFRSNETENNFVMSSSSTLHDRRRVTRKSDPPKIVKVGRPTTKPVIATQAPLSHKRASTSRDNVQGIRERDSKKKIWSR 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4218g00004 1052 Gene3D - 55 212 - -
Gabi4218g00004 1052 MobiDBLite consensus disorder prediction 988 1052 - -
Gabi4218g00004 1052 Coils Coil 770 818 - -
Gabi4218g00004 1052 Coils Coil 834 911 - -
Gabi4218g00004 1052 ProSiteProfiles Kinesin motor domain profile. 399 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 MobiDBLite consensus disorder prediction 1034 1052 - -
Gabi4218g00004 1052 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 814 IPR027640 GO:0003777|GO:0007018
Gabi4218g00004 1052 Coils Coil 246 266 - -
Gabi4218g00004 1052 FunFam Kinesin-like protein KIN-14R 55 210 - -
Gabi4218g00004 1052 FunFam kinesin-like protein KIN-14R 348 723 - -
Gabi4218g00004 1052 Coils Coil 365 399 - -
Gabi4218g00004 1052 MobiDBLite consensus disorder prediction 993 1007 - -
Gabi4218g00004 1052 Coils Coil 320 340 - -
Gabi4218g00004 1052 SMART kinesin_4 397 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 ProSitePatterns Kinesin motor domain signature. 621 632 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi4218g00004 1052 Gene3D Kinesin motor domain 394 766 IPR036961 -
Gabi4218g00004 1052 Pfam Kinesin motor domain 405 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 757 IPR027417 -
Gabi4218g00004 1052 CDD KISc_C_terminal 397 723 - -
Gabi4218g00004 1052 Coils Coil 742 762 - -
Gabi4218g00004 1052 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4218g00004 1052 MobiDBLite consensus disorder prediction 1019 1033 - -
Gabi4218g00004 1052 Pfam Malectin domain 61 204 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4218g00004 Gabi-Chr4218 45999 52140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4218g00004 371 774 Calmodulin-binding Proteins AT5G65930 40.831 2.84e-85 299