Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00087 ATGGACCTGCAAAATTCCCTCTCGCAATCAATAGTCCCGTTGGCATTTACCATCTTGGGGCTTTCGTTATTTCTCTCTGTTTTTTCGTTCATATCGAGAAGGCGAACTGCTGCAGCTGGAAAAGCACCACCAGAAGCTAGCGGTGCGTGGCCTTTGATTGGGCATCTCCACCTTTTAGGTGGCTCACAACCACCTCATATAACTTTGGGCAACATGGCTGACAAATATGGACCCGTCTTCACCTTACGGCTTGGTGTTCACCGAACTTTGATTGTGAGCAATTGGGAAATGGCTAAAGAGTGCTTTACTGTAAACGACAAAGCATTTGCTAGCCGTCCTAAATCTGTAGCCTTCGAAGTGTTGGGATACAACTTTTCCATGTTAGGGTTCAGCCCCTACGGTTCCTATTGGCGTCACGTACGCAAGATAGCCACCATGGAGCTCCTCTCTACCAAGCGGATAGAGATGCTCAAGAACGTCATCGAATCGGAGGTGAAAGCAGCAATAAAAGGGAGTCACAGTTTTTGGTTAAAGATGAACAAGAGTGGTTCCCAAAAGGCAGCGAGTGAGATGAATAAATGGTTTGGGGACATAATCCTAAACGTTATGTTCAGATTGATGTTAGGAAAACGTTTTGGTGACCATGAAGAGAGCGAAAGGATCCAAAAACCATTAAGAGACTTTTTCGATCTGAGTGGTTCATTCGTTGTCTCTGATGCACTGCCGTATTTGAGATGGTTGGATTTGGATGGACGAGAGAAGCAAATGAAGAGGACGGCAAAAGAGTTAGACAGCTATGTTCGAGTTTGGCTCGAAGAACACAAACGTAACAGGAATTGTGGTGAAGGGGAATGGAAGGGTAAGCATGACTTCATGGACACGCTTCTTTCCATTGTTGATGATGAAGGTGAAGGGTTTGACGGATGTGATGCAAACACCATTGTCAAAGCTACTTGCCTGGCACTAATTTTAGCTGGCACAGACACTACGACAGGGACATTGACTTGGGCTCTCTCCCTTCTTCTCAACAACCGTGAAGTTCTAAACAAGGCCATACATGAATTAGATACACAAATTGGAAGGGATAAGATGGTTGTGGAATCTGACTTGCAGAAGCTTGAGTATCTCCAAGCCATTCTCAAGGAAACATTGCGCTTGTATCCACCAGGACCACTCAGTTTGCCACACGAGTCCATGGAAGACTGCACCGTTGGTAGATACCATGTTCCCGCTGGCACACGTCTCTTGACTAACATTTCAAAAATTCAACGAGATCCCCTATTATATATGCACCCCTTGGAGTTTCGCCCAGAGAGATTCCTCACAACACACAAGGACATTGATGTCAGGGGACAACATTTTGAATTGATTCCATTCGGTGCAGGTAGAAGAATGTGTCCTGGTCTCTCATTCGCTCTTCAAACAATGCAACTAACACTTGCTACTCTGCTACATGGGTTTGACATTGTGACTCCTGATGGAGGACCAGTCGATATGCTTGAACGTGTTGGGTTAACCAATATCAAAGCCTCTCCGCTCCAAGTCATTCTTACACCGCGTCTCTCTGCCCATGCTTACGCTGAAATTTAA 1590 0.4547 MDLQNSLSQSIVPLAFTILGLSLFLSVFSFISRRRTAAAGKAPPEASGAWPLIGHLHLLGGSQPPHITLGNMADKYGPVFTLRLGVHRTLIVSNWEMAKECFTVNDKAFASRPKSVAFEVLGYNFSMLGFSPYGSYWRHVRKIATMELLSTKRIEMLKNVIESEVKAAIKGSHSFWLKMNKSGSQKAASEMNKWFGDIILNVMFRLMLGKRFGDHEESERIQKPLRDFFDLSGSFVVSDALPYLRWLDLDGREKQMKRTAKELDSYVRVWLEEHKRNRNCGEGEWKGKHDFMDTLLSIVDDEGEGFDGCDANTIVKATCLALILAGTDTTTGTLTWALSLLLNNREVLNKAIHELDTQIGRDKMVVESDLQKLEYLQAILKETLRLYPPGPLSLPHESMEDCTVGRYHVPAGTRLLTNISKIQRDPLLYMHPLEFRPERFLTTHKDIDVRGQHFELIPFGAGRRMCPGLSFALQTMQLTLATLLHGFDIVTPDGGPVDMLERVGLTNIKASPLQVILTPRLSAHAYAEI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00087 529 CDD CYP82 77 520 - -
Gabi4217g00087 529 Coils Coil 526 529 - -
Gabi4217g00087 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 Pfam Cytochrome P450 46 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 Gene3D Cytochrome P450 38 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PANTHER CYTOCHROME P450 82C3-RELATED 24 526 - -
Gabi4217g00087 529 FunFam Cytochrome P450 82C4 33 518 - -
Gabi4217g00087 529 SUPERFAMILY Cytochrome P450 48 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00087 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00087 Gabi-Chr4217 788572 792234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00087 21 527 Cytochrome P450 AT4G31940 50.000 1.95e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00087 - - gmx:100778017 760.755