Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00086 ATGAGTCTCATGATTCAGTATCTGAACGCAGCAGTTGCCGGAGTTGTCGGCATAGTAATAATTTCTTACTTCTTTTACTTTACGAAGAGGGATAGAGCAGGTGATGGCCGCAAGCCACCGGTGGCCGCTGGTGGCTGGCCTTTGATCGGTCATCTTCACCTCTTAGGTGGTTCCGGTCAACCTCCTCACATAACCCTAGGAGCCTTAGCAGACAAGCATGGACCAATATTCAGCATCAAAATCGGTGTGCACCCAGCTGTGGTGGTCAATACTTGGGAGCTAACCAAGGAGTGTTTCACCAATCTTGATGTCATAGTCTCATCTCGTCCCAAATTTACAGCCGCAAAAATCTTGGGACATGACTATGCTAATTTTGGGTTCTCCCCTTACGGGGAATTCTGGCGCCAGATGCGTAAGATAACTGCTTCAGAGTTACTCTCCACTCGCCGATTTGAATTGCTTCGAGATATTAGAGACTCAGAGATGCAGATCTCGCTGAAAGAACTACACAGAGCATGGGTTGAGAAAAAAGGTGATTTCTTGGTGGAGATGAAGCAGTGGTTAGGAGACATGAATCTCAACGTGATTCTGAGAATGATTGCTGGAAAGCGATACTCCAACAAAAGTGCAGATGAGAAACAGGTAAGGCGGGTTCGGAGGGTCTTTAGAGAGTTCTTTAGTTTAACAGGATCGCCTGTTATTGGAGACGCCATTCCCGTTCTTGGATGGCTTGATTTATTGGGTGGTCAAGTCAAGGAGATGAAAAACACCGCTAAAGAAATGGACAGCATCGTTTGTGAATGGTTAGAAGAACATCGCCAGAGAAGATCAGATTCTGGTGAGACTAAAACAGAGCAAGATTTCATTGATGTCTTGTTCTCTGTACTTGACGGCGTTGACCTTAATGGTTACGATGCTGACACTGTCAACAAAGCCACCTGCTTGACGCTGATTGCTGGGGCAACGGATACTACAACAGTTACTATAACATGGGCACTGTCGTTATTGCTGAATAATCGTCATGCTTTGAAGAAAATTCAAGATGAATTGGATGAGCAAGTGGGCAAGGAAAGACTAGTGAATGAATCGGATATTAACAAATTAGAATACCTTCAAGCTGTAGTTAAAGAGACACTGCGGTTGTATCCAGCTGGGCCACTCTCAGGCCCGCGTGAATTCACAGAGGATTGTACCTTAGGTGGGTACCATATCGAGGCAGGCACTCGAATGATTTTGAACCTTTGGAAGCTGCATAGAGACCCACGGGTATGGTCAGACCCGTTAGAGTTTAAACCAGAAAGGTTCATGACCACGCACAAGGCTTTGGATGTTAAGGGTCAACATTTTGAACTGCTTCCTTTTGGCGGCGGAAGAAGGGCCTGCCCTGGTATATCATTTGGCCTTCATATGACACACTTGGCATTAGCTGCTTTCTTGCAAGCATTTGAGATCACTACCCCGTCCAATGTCCAGGTTGATATGAGCGCCACCTTTGGTCTCACGAACATCAAAACCACCCCACTTGAGGTTTTAGTCAAACCTCGTTTATCATATCACCTTCTCTTTATCGATGAAGCTCAAGTAAATCCAACGCATTAA 1599 0.4553 MSLMIQYLNAAVAGVVGIVIISYFFYFTKRDRAGDGRKPPVAAGGWPLIGHLHLLGGSGQPPHITLGALADKHGPIFSIKIGVHPAVVVNTWELTKECFTNLDVIVSSRPKFTAAKILGHDYANFGFSPYGEFWRQMRKITASELLSTRRFELLRDIRDSEMQISLKELHRAWVEKKGDFLVEMKQWLGDMNLNVILRMIAGKRYSNKSADEKQVRRVRRVFREFFSLTGSPVIGDAIPVLGWLDLLGGQVKEMKNTAKEMDSIVCEWLEEHRQRRSDSGETKTEQDFIDVLFSVLDGVDLNGYDADTVNKATCLTLIAGATDTTTVTITWALSLLLNNRHALKKIQDELDEQVGKERLVNESDINKLEYLQAVVKETLRLYPAGPLSGPREFTEDCTLGGYHIEAGTRMILNLWKLHRDPRVWSDPLEFKPERFMTTHKALDVKGQHFELLPFGGGRRACPGISFGLHMTHLALAAFLQAFEITTPSNVQVDMSATFGLTNIKTTPLEVLVKPRLSYHLLFIDEAQVNPTH 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00086 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gabi4217g00086 532 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 Pfam Cytochrome P450 43 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PANTHER CYTOCHROME P450 82C3-RELATED 19 520 - -
Gabi4217g00086 532 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00086 532 CDD CYP82 74 515 - -
Gabi4217g00086 532 FunFam Cytochrome P450 82C4 29 513 - -
Gabi4217g00086 532 SUPERFAMILY Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00086 Gabi-Chr4217 774023 775823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00086 40 521 Cytochrome P450 AT4G31940 49.797 4.23e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00086 - - gmx:100810391 807.749