Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00085 ATGAATCCCTCTTTGGAATTAACTATAGTTGCCATATTGGTGTCCTTGTTATTTCTGTGGTATGCTTTTGTGGGAAAGAGGAGGATTAAAGGAGAAGGCAAGAGTGAAGATGCTCCTGTACCAGCTGGTGCTTTGCCAGTTATTGGTCACCTCCACCTTTTGGGTGGTGATGATCAGCTTCTCTATCGAACACTCGGAGCAATGGCTGATCAATATGGGCCAGCATTTAATATCTGGCTTGGTAGTCGCAGAGCATTTGTAGTGAGTAGCTGTGAAGTGGCAAAGGAATGCTTCACAACTAATGACAAGGCACTTGCCTCGCGTCCCACAACAGTTGCTGCAAAGCACATGGGTTACAACTATGCAGTGTTTGGTTTTGCTCCTTATAGCCCCTTTTGGCGTGAAATGAGAAAGATTGCAACTCTTGAACTTCTTTCCAACCGCAGACTTGAAATGCTTAAGCATGTCAGAGTGTCTGAGCTCAACATGGGTATAAGGGACCTATACAACTCTTGGGTCCAAAATAGCTCACCTTCCGTGCTTGTAGAACTAAACCGATGGTTAGAGGATTTGACTCTGAATATGGTGGTTAGAATGGTAGCAGGGAAACGCTATTTTGGTTCCTCAGCCACCTGTGATGATGATGAAGCAAGGCGGTGCCAGAAGGCAATTAATCAGTTTTTTCATCTTATTGGCATTTTTGTGGTTTCAGACGCGCTTCCGTTTTTGCGTTGGTTCGATGTGCAGGGGCATGAGAGGACGATGAAGAAGACAGCGAAGGAGTTAGATAACATACTTGAAGGCTGGCTAAAGGAGCATCGCATGCAAAGAGTTAATGGTGAGGTTAAGGCAGAGGGTGAGCAGGACTTCATTGATGTGATGTTATCGCTTCAAGAGGGTGGTCACCTATCAAATTTCCAATATGATTCTGATACAAGCATCAAATCCACCTGCCTAGCTCTTATACTTGGTGGGAGTGATACCACAGCAGGCACGCTTACTTGGGCCATCTCTTTACTCCTCAACAATCGCCAAGCATTAAAAAAGGCACAAGAAGAATTGGACCAGAATGTTGGGATGGATCGGCAAGTTGAGGAGTCAGACATTAGAAACCTTGTATATCTTGAAGCCATTATTAAGGAAACCCTCCGGTTATACCCAGCTGGTCCCCTCCTAGGACCAAGGGAAGCCCAAGAAGATTGTAATGTTGCTGGTTATCATGTCCCTGCTGGCACCCGCTTGGTGGTTAATTTATGGAAGATTCATAGGGATCCAAGGATTTGGAAAGATCCTTCTGCTTTTCGACCCGAGAGATTTCTCACGAGCCATGCAATTGATGTTAAAGGCCAAAACTTTGAACTCATTCCATTTGGCTCTGGAAGAAGGTCATGTCCTGGAATGTCGTTTGCACTCCAAGTTCTTCATTTAACACTTGCTCGTCTGCTTCATGGATTTGAATTTGCAACCCCATCAAATCAACCAGTTGACATGACTGAAAGCCCAGGTTTAACCATTCCTAAAGCAACTCCATTAGAGGTTCTCCTTTCTCCCCGCCTTCCAGCCAAATTATATGCCTACTGA 1581 0.4491 MNPSLELTIVAILVSLLFLWYAFVGKRRIKGEGKSEDAPVPAGALPVIGHLHLLGGDDQLLYRTLGAMADQYGPAFNIWLGSRRAFVVSSCEVAKECFTTNDKALASRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEMLKHVRVSELNMGIRDLYNSWVQNSSPSVLVELNRWLEDLTLNMVVRMVAGKRYFGSSATCDDDEARRCQKAINQFFHLIGIFVVSDALPFLRWFDVQGHERTMKKTAKELDNILEGWLKEHRMQRVNGEVKAEGEQDFIDVMLSLQEGGHLSNFQYDSDTSIKSTCLALILGGSDTTAGTLTWAISLLLNNRQALKKAQEELDQNVGMDRQVEESDIRNLVYLEAIIKETLRLYPAGPLLGPREAQEDCNVAGYHVPAGTRLVVNLWKIHRDPRIWKDPSAFRPERFLTSHAIDVKGQNFELIPFGSGRRSCPGMSFALQVLHLTLARLLHGFEFATPSNQPVDMTESPGLTIPKATPLEVLLSPRLPAKLYAY 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00085 526 PANTHER CYTOCHROME P450 82C3-RELATED 17 524 - -
Gabi4217g00085 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 Gene3D Cytochrome P450 25 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 Pfam Cytochrome P450 41 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Gabi4217g00085 526 CDD CYP82 73 518 - -
Gabi4217g00085 526 FunFam Cytochrome P450 82C4 28 516 - -
Gabi4217g00085 526 Coils Coil 337 357 - -
Gabi4217g00085 526 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4217g00085 526 SUPERFAMILY Cytochrome P450 41 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00085 Gabi-Chr4217 753099 755200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00085 1 524 Cytochrome P450 AT4G31940 66.981 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00085 K23136 - gmx:100811993 934.48