Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00084 ATGTACACTACTTGCCATACAGTAATGCAAACTTTAGCGCCTTTGCCAGAGCCAGACCTCTCCTTAAACATAAGCCCGCCTTTCATTTCAGATTCTGAGGCCAAAGAAGTGGGAAGCTACAATGGATTAACATTAACTAGCAAAACGCTTTACAACGACATGTGCTCAACCTCTGATTCAGGTAGCAGTGGAAGTGATTCAAGCCATGAAAATGGCTTTTCCCACAAGGGAACTGTCTATAAACTTGGTCATCATGAACCAACATTGAGCTTAGGCTTTGAAACGGAAGATTTGAATCCCCATCCAGCACGAGGACTCTCAAGAAACTTTAATGATCACATCCACAGCTACCAACCTCACATCTATAGCCGCGATTTCAAACGAAATGCTAGAGTCATTCATGGTGTGAAAAGAAGCATCAGAGCTCCTAGAATGAGATGGACTACAACCCTCCATGCTCATTTTGTCCACGCAGTTCAGCTTCTTGGTGGTCATGAAAGGGCAACTCCTAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGGTCATGGGCAGACAGATATGGGCTTCAACCAAAGGACACGGATTGTCGATCTGCATGGATCAGTCTCAGCTTGTGAGAGAGGCAATTTGCCACAGCCATTGCAAACATCCCAGAGGGCATCATGGCAAACATCAAGGGAGACAAATACAAATAACTATAGACAAAAACCTGTAGTCAGTTTGATGTACTCTGATCTGAAAGGAAACCAAACCATGGTAAGTTGGTTGGATTCTAGCTCTTTGTCACGTTCCGAGGTGATGCTTGACCTAGAATTCACCCTTGGAAGGCCCGCTTTGCAAACAGACCACGCGGAATCATCCAGAGAGTTAACTCTTCTCAAGTGTTAA 960 0.4427 MYTTCHTVMQTLAPLPEPDLSLNISPPFISDSEAKEVGSYNGLTLTSKTLYNDMCSTSDSGSSGSDSSHENGFSHKGTVYKLGHHEPTLSLGFETEDLNPHPARGLSRNFNDHIHSYQPHIYSRDFKRNARVIHGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDMGFNQRTRIVDLHGSVSACERGNLPQPLQTSQRASWQTSRETNTNNYRQKPVVSLMYSDLKGNQTMVSWLDSSSLSRSEVMLDLEFTLGRPALQTDHAESSRELTLLKC 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00084 319 MobiDBLite consensus disorder prediction 56 74 - -
Gabi4217g00084 319 MobiDBLite consensus disorder prediction 56 79 - -
Gabi4217g00084 319 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 307 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gabi4217g00084 319 MobiDBLite consensus disorder prediction 232 257 - -
Gabi4217g00084 319 FunFam Myb family transcription factor 141 199 - -
Gabi4217g00084 319 Pfam Myb-like DNA-binding domain 144 195 IPR001005 -
Gabi4217g00084 319 MobiDBLite consensus disorder prediction 230 257 - -
Gabi4217g00084 319 SUPERFAMILY Homeodomain-like 140 197 IPR009057 -
Gabi4217g00084 319 Gene3D - 142 199 - -
Gabi4217g00084 319 NCBIfam myb-like DNA-binding domain, SHAQKYF class 143 196 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00084 Gabi-Chr4217 747571 750714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00084 69 216 G2-like Transcription Factor Family AT5G42630 60.390 1.12e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4217g00084 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00084 - - gmx:100780143 421.394