Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00081 ATGCAGGCCTTAGGATGCTTCCTCGTACTCTCATTATTCCTCCATTCATCACCCTTCTTTTCCCATGCACTTTCCAGTGATGAAGCCTCTTTCATTGCTCGTCGCCAATTGTTACACCTTCATGAGAACGATGAATTACCCGAGAGCTATGAAGATACCTATAAAACAAATCTAACATTCCCTAATGGTAGACTCAAACGTGCTTATATTGCACTCGAAGCATGGAAAAAAGCGATATATTCAGACCCAACAAACTTCACTGGCAATTGGGTGGGTCCAAAGGTTTGCTCATACAACGGAGTTTTCTGTGAAAAAGCACTCGACGACCCAAAGATCGATGTTGTGGCTGGGGTTGATCTTAACAATGCAGACATCGCAGGGTACATTCCTCCCGAGTTCGGTTTGTTAACTGACATTGCTCTTTTGCACATAAACTCAAACAGGTTTTGTGGGGTTCTCCCAAAAAGCTTCTCCAAGCTAACGCTTTTGCACGAGTTAGATATCAGCAACAACCGCTTTGTTGGTCCATTCCCCATGCCCGTTCTTTCAATTCCTGATATCAAATACCTTGACCTGAGGTTTAATAACTTCGAAGGGGCATTGCCTTATGAGCTTTTCAACAAAAGCCTCGATGCTATCTTTTTGAACAACAACCGATTCACATCCACAATTCCAGAGAATCTTGGTTCATCTCCAGCTTCGGTTGTTGTTTTGGCAAATAACCATCTGAGTGGTTGCGTTCCTGCAAGCATTGGTGATATGAAAAAGACCTTGAATGAGTTTGTTTTAATCAACAACAACCTTAATGGGTGCTTGCCCTCAGACATTGGAAAACTCGAACAGGTTTCGGTAATTGATGTCAGCCACAACTCGTTCGTTGGTGTATTGCCAAGGACCTTCAACGGTCTCGAAAACGTGGAGCTGTTATCCATTGCACACAACAAGCTCACAGGTTTTGTGCCACGTAGCATTTGTAGCTTGCCCAGCTTGGTTAACTTCACATTTTCATATAACTATTTCAATGGTGAGGAAGAAGGTTGTGTGCCTCCTAGAAAGGACATTGTGTTGGAAGATAAGAACAACTGTATTCCAGATAGACCAAAACAGAAGGTGGCAAACGCTTGCATTCCCGTCATAAGCAAACCTGTTGATTGCAGCAAGGCACAGTGTGGCCAATCATCTCATCACTCTAATCCTCCAACTGAAAAGTCAACACCTTCTGTACCCAAATCACCATCAAAATCTACTCCTTCTGTACCTAAATCACCATCAAAATCTACTCCTTCTCCCTCCAATCCTCCAGCTGAGAAGCAAACACCACCACCATCGAAACAAACACCACCATCGAAACAAGAACCACCCAAAGCACCCCCATCACCAGAAGATGATCCTCACCGTGAAGCACCCCGCCGACGAGAAAGACCTCCACACTCTCCACCACCACCACCTGCTGTCCACTCTTCACCACCACCACCAGTCCATTCTCCTCCTCCACCAGTTCACTCCCCACCACCACCGGTTCACTCACCACCCCCGCCGGTTCATTCACCACCACCACCTGTTCACTCACCACCACCACCTGTTCACTCACCACCACCACCGGTTCGCTCACCACCTCCACCAGTTCACTCACCACCACCACCTGTTCACTCACCACCACCACCTGTTCACTCACCACCTCCACCAGTTCACTCCCCACCACCACCCGTTCACTCCCCACCACCACCTGTCTACTCTCCACCACCTCCTGTTCACTCTCCACCACCCCCACAGGTACATTCTCCTCCTCCACCAGTTCACTCTCCACCACCTCCACCGGTCTATTCTCCTCCTCCACCAGTTCACTCTCCACCTCCTCCACCGGTACATTCTCCTCCACCACCCGTTCACTCACCTCCACCACCCGTCTACTCTCCGCCACCACCAGTTCACTCTCCACCGCCACCAGTACATTCCCCACCACCACCTACACCAACTGTTTCACCTCCTCCGCCAGAAGAAGAGATTGTTCTTCCCCCTCACTTCGGCTCTTCATATGCATCGCCGCCTCCACCTATCGTTGCCGGCTACTAA 2073 0.4872 MQALGCFLVLSLFLHSSPFFSHALSSDEASFIARRQLLHLHENDELPESYEDTYKTNLTFPNGRLKRAYIALEAWKKAIYSDPTNFTGNWVGPKVCSYNGVFCEKALDDPKIDVVAGVDLNNADIAGYIPPEFGLLTDIALLHINSNRFCGVLPKSFSKLTLLHELDISNNRFVGPFPMPVLSIPDIKYLDLRFNNFEGALPYELFNKSLDAIFLNNNRFTSTIPENLGSSPASVVVLANNHLSGCVPASIGDMKKTLNEFVLINNNLNGCLPSDIGKLEQVSVIDVSHNSFVGVLPRTFNGLENVELLSIAHNKLTGFVPRSICSLPSLVNFTFSYNYFNGEEEGCVPPRKDIVLEDKNNCIPDRPKQKVANACIPVISKPVDCSKAQCGQSSHHSNPPTEKSTPSVPKSPSKSTPSVPKSPSKSTPSPSNPPAEKQTPPPSKQTPPSKQEPPKAPPSPEDDPHREAPRRRERPPHSPPPPPAVHSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVRSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPQVHSPPPPVHSPPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPTPTVSPPPPEEEIVLPPHFGSSYASPPPPIVAGY 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00081 690 SUPERFAMILY L domain-like 78 349 - -
Gabi4217g00081 690 MobiDBLite consensus disorder prediction 478 670 - -
Gabi4217g00081 690 MobiDBLite consensus disorder prediction 456 477 - -
Gabi4217g00081 690 Pfam Leucine rich repeat 282 338 IPR001611 GO:0005515
Gabi4217g00081 690 MobiDBLite consensus disorder prediction 423 455 - -
Gabi4217g00081 690 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 254 343 - -
Gabi4217g00081 690 MobiDBLite consensus disorder prediction 386 422 - -
Gabi4217g00081 690 PRINTS Proline rich extensin signature 471 496 - -
Gabi4217g00081 690 PRINTS Proline rich extensin signature 412 433 - -
Gabi4217g00081 690 PRINTS Proline rich extensin signature 397 409 - -
Gabi4217g00081 690 PRINTS Proline rich extensin signature 441 457 - -
Gabi4217g00081 690 Gene3D Ribonuclease Inhibitor 68 361 IPR032675 -
Gabi4217g00081 690 MobiDBLite consensus disorder prediction 386 690 - -
Gabi4217g00081 690 FunFam Leucine-rich repeat extensin-like protein 1 69 230 - -
Gabi4217g00081 690 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00081 Gabi-Chr4217 725218 727290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00081 4 391 Trihelix Transcription Factor Family AT3G19020 61.795 3.22e-178 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00081 - - gmx:100780677 635.565