Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00072 ATGGACGCCACTGGCAATCGTGTTTTGGCACAAGGAGTTATCTTCTTTGTGATTGTATCTCTGGCTGCGGGGAGCGAGGGCAGAAGCATCTTAGTTGGAGACACTGAAGGTTGGCGTGCGGGCACTAACTACACACAATGGGCAATACAAAATAGCCCCTTCCACATAAATGACACGCTGGTGTTCAAGTATCCCCCACCAGGAAATTCGACGGTTGCTCAGAGCGTTTACTTGCTACCAAACATGTGGAGCTACATGACCTGCGAGTTCGAGGGTGCAAAGCTGTTGGGGAACGCAGCTCAGGGTGCTGGTGAGGGCTTTAAGGTTGAACTCAATCAGTTAAGACCTTACTACTTTGCCTCTGCAGAAGTCAACGCCTATGACTGCATTGCTGGTCTTACCAAGTTCATCGCTGACCCATCTAAACCTTCCTCTTAG 438 0.4977 MDATGNRVLAQGVIFFVIVSLAAGSEGRSILVGDTEGWRAGTNYTQWAIQNSPFHINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFEGAKLLGNAAQGAGEGFKVELNQLRPYYFASAEVNAYDCIAGLTKFIADPSKPSS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00072 145 PANTHER GLYCINE-RICH PROTEIN-LIKE 26 141 - -
Gabi4217g00072 145 Gene3D - 26 138 IPR008972 -
Gabi4217g00072 145 ProSiteProfiles Phytocyanin domain profile. 28 142 IPR003245 GO:0009055
Gabi4217g00072 145 SUPERFAMILY Cupredoxins 28 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00072 Gabi-Chr4217 631731 632437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00072 8 121 Phytocyanin Superfamily AT3G01070 28.947 6.26e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00072 - - vra:106760467 221.861