Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00071 ATGGAAGCAATGAACAGAGGCTCCTCCTCAACCACGTCATCATCCGACTCTTCCTCTTCAGAGTCGAACCCAACGAATCTCAACAAACCCGACAGAATCAAAGGCCCGTGGAGTGCCGAAGAGGATCGGATTCTGACCCGACTAGTCGAGCGATACGGGCCCCGAAACTGGTCCTTGATCAGCCGTTACATAAAGGGGAGGTCTGGCAAGTCATGCAGGCTTCGGTGGTGTAACCAGCTGAGCCCAACCGTGGAGCACCGTCCCTTCTCGGCCCAAGAGGACGAGACCATCATAGCTGCTCACGCCCAGTACGGTAACAGGTGGGCCACCATTGCCCGATTATTACCGGGTCGAACCGACAATGCTATAAAGAACCACTGGAATTCCACCCTCAAGCGCCGAGCCGGTGGTGTTAGTGTTAGTGTTAGTGTTACTACAAACGAAGGAGAGGGACCCATGGCCACTTCTTCAGGTCCGTTGGAGGATGACCCGTTGACCGCGTTGACTCTGGCTCCTCCGGGGATTAGCAATGGTTCTGTAACTGAGGCTGAGGCTGAACACCGACAGAATGTGCCGTCGGGGTTTTGGGATATCATGAGAGATGTGATTGCCAGGGAAGTGAGGGAATATGTGTCTTCTAATTTTTCTGATAACTCGGGTTTTCATTGA 669 0.5321 MEAMNRGSSSTTSSSDSSSSESNPTNLNKPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSAQEDETIIAAHAQYGNRWATIARLLPGRTDNAIKNHWNSTLKRRAGGVSVSVSVTTNEGEGPMATSSGPLEDDPLTALTLAPPGISNGSVTEAEAEHRQNVPSGFWDIMRDVIAREVREYVSSNFSDNSGFH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00071 222 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Gabi4217g00071 222 FunFam MYB transcription factor 34 85 - -
Gabi4217g00071 222 SMART sant 85 133 IPR001005 -
Gabi4217g00071 222 SMART sant 33 82 IPR001005 -
Gabi4217g00071 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 84 IPR017930 -
Gabi4217g00071 222 Gene3D - 88 134 - -
Gabi4217g00071 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 135 IPR017930 -
Gabi4217g00071 222 MobiDBLite consensus disorder prediction 1 29 - -
Gabi4217g00071 222 FunFam Transcription factor MYB44 88 134 - -
Gabi4217g00071 222 Gene3D - 33 85 - -
Gabi4217g00071 222 PANTHER MYB PROTEIN-RELATED 34 175 - -
Gabi4217g00071 222 CDD SANT 88 131 IPR001005 -
Gabi4217g00071 222 ProSiteProfiles Myb-like domain profile. 29 80 IPR001005 -
Gabi4217g00071 222 SUPERFAMILY Homeodomain-like 31 127 IPR009057 -
Gabi4217g00071 222 CDD SANT 36 78 IPR001005 -
Gabi4217g00071 222 Pfam Myb-like DNA-binding domain 37 95 - -
Gabi4217g00071 222 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00071 Gabi-Chr4217 628094 628768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00071 31 150 MYB Transcription Factor Family AT3G50060 72.727 5.16e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi4217g00071 Myb_DNA-bind_6 7.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00071 - - gmx:778051 332.413