Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00039 ATGGCCGTAGCAATAGGAAGAAGCTTCCCTTTTCAGCCACGCGCTTTATTCAACAGTAAGAGCATAGATAAACCTTCACCAGCCGGAAGATACTCGTGGGGAGGAGGAGTCACTCCACGTAATAGGCAAGTTTGTGTGGCAGCACAACAGAGACCTACATGGCTCCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTTCCTGGAGATTTCGGGTTCGACCCACTTGGGCTTGCAGAGGATCCAGAAAGCTTGAAGTGGTACGTGCAGGCAGAACTGGTTCATGCTCGCTTTGCAATGCTTGGCGTATTTGGAATTCTAGTGACAGATCTACTTCGCGTCACAGGACTTAGTAAGATACCAGTTTGGTTTGAAGCTGGTGCCGTAAAATACGAGTTTGCTAACACAGAGACACTCTTCATTGTTCAGCTACTTTTGATGGGGTTTGCCGAAACAAAAAGGTACATGGATTTCGTTAGTCCTGGTTCTCAAGCTAAAGAAGGATCCTTCTTTGGATTGGAAGCTGCATTAGAAGGCTTAGAGCCAGGATACCCTGGGGGTCCTCTGCTAAATCCTCTTGGTCTGGCTAAAGACATTAAAAATGCTCATGACTGGAAGCTTAAAGAGATCAAGAACGGGCGACTTGCAATGGTGGCAATTCTTGGCATCTTTGTACAAGCTTCGGTGACTCATGTTGGGCCAATTGATAACCTTGTGGAGCATCTCTCCAATCCATGGCATAAAACTGTTATTCAGACCCTTGCAAGTTCAAGTTCCTAG 783 0.4662 MAVAIGRSFPFQPRALFNSKSIDKPSPAGRYSWGGGVTPRNRQVCVAAQQRPTWLPGLDPPPYLDGTLPGDFGFDPLGLAEDPESLKWYVQAELVHARFAMLGVFGILVTDLLRVTGLSKIPVWFEAGAVKYEFANTETLFIVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTVIQTLASSSS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00039 260 FunFam Chlorophyll a-b binding protein, chloroplastic 52 259 - -
Gabi4217g00039 260 SUPERFAMILY Chlorophyll a-b binding protein 46 257 - -
Gabi4217g00039 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 44 255 IPR001344 GO:0009765|GO:0016020
Gabi4217g00039 260 Pfam Chlorophyll A-B binding protein 60 228 IPR022796 -
Gabi4217g00039 260 Gene3D Chlorophyll a/b binding protein domain 61 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00039 Gabi-Chr4217 398842 400600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00039 43 252 Chloroplast and Mitochondria Gene Families AT3G61470 47.393 8.08e-63 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00039 K08911 - gmx:100804934 429.869