Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00029 ATGAATTTTAGGAGCTCAGGAAATGAGCCGGGGGCCGGCGATAACGGCGGCGGGAGGCCGGCGGGGAATTATTCACTGGCACGGCAACCGTCGGTGTACTCTCTGACGTTCGACGAGTTCATGAGTAGCATGGGGGGTTCAGGGAAGGACTTTGGGTCGATGAACATGGACGAGTTGCTCAAGAACATTTGGACCGCCGAAGAGGTTCAAACCATGGCACCAGGGAGCGGCGTCGCCGTCGCCGGCGCCGGCGAAGAGGGTACCGTGGGTATTAACCATTTACAGAGGCAAGGGTCGTTGACACTGCCGCGAACTCTTAGCCAGAAGACAGTGGATGAGGTTTGGAAGGATATTTCGAAGGATTATGGTGGCCATGGAGGTCCTAATTTGGCGCAGACACCGAGACAGCCAACGTTGGGAGAGATGACGTTAGAGGAGTTCTTATTAAGAGCCGGTGTTGTCAGAGAAGATGCAAATGCAAGGCCAAACGATGGAGTCTTCGTTGATCTGTCTCGTGCTGGGAATAACAACGGTTTAGGATTGGGGTTTCAGCAGTTGAACAAGGTTTCAGGATTTATGGGTAACAGGATTCCTTTGAATAATAATGATCCAATGGTGGGTCTTCAGTCTCCTTCCAATTTGCCCTTGAACGTTAACGGGGTTCGATCATCCAATCAGCAACAGATGCAGAGTTCACAACAACAACAACATCAACATCAACATCATCAGCAGCAGCATCAGAATCAGCAGCAGCAGCAGATATTTCCTAAGCAGCCTGGTATGAGTTATGCAACTCAGATGCCTCTGACGAGTAATCAAGGAATGAGGGGTGGACTTGTGGGACTTGGTGTGGATCAGGGTCTGAATGGTAATCTCGTGCAAGGTGGAGGGATTGGTATGGTTGGTTTGGCACCTGGGACTGTTCATGTTGCTACTGGGTCACCGGCTAACCAGATATCCAGTGATAAAATTGGAAAGAGTAATGGTGATACTTCTTCCATATCACCGGTTCCTTATGTCTTTAATGGTGGTCTGCGAGGGAGGAAGAACGGTGGAGCTGTTGAGAAGGTAATTGAGAGGAGGCAGAGAAGAATGATAAAGAACAGAGAATCAGCTGCTAGGTCGCGGGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAGGACAACCAAGAACTTCAGAAAAAGCAGGCAGAAATCATGGAGATTCAGAAAAAGCAAGTTAAGGAAATGATGAATTTGCATCGAGAAGTCAAGAGAAGATGCTTAAGACGAACACAAACTGGTCCATGGTAG 1317 0.4867 MNFRSSGNEPGAGDNGGGRPAGNYSLARQPSVYSLTFDEFMSSMGGSGKDFGSMNMDELLKNIWTAEEVQTMAPGSGVAVAGAGEEGTVGINHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGGPNLAQTPRQPTLGEMTLEEFLLRAGVVREDANARPNDGVFVDLSRAGNNNGLGLGFQQLNKVSGFMGNRIPLNNNDPMVGLQSPSNLPLNVNGVRSSNQQQMQSSQQQQHQHQHHQQQHQNQQQQQIFPKQPGMSYATQMPLTSNQGMRGGLVGLGVDQGLNGNLVQGGGIGMVGLAPGTVHVATGSPANQISSDKIGKSNGDTSSISPVPYVFNGGLRGRKNGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEDNQELQKKQAEIMEIQKKQVKEMMNLHREVKRRCLRRTQTGPW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00029 438 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 363 378 IPR004827 GO:0003700|GO:0006355
Gabi4217g00029 438 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 358 415 - -
Gabi4217g00029 438 MobiDBLite consensus disorder prediction 203 255 - -
Gabi4217g00029 438 CDD bZIP_plant_BZIP46 360 414 - -
Gabi4217g00029 438 SUPERFAMILY Leucine zipper domain 360 409 IPR046347 GO:0003700|GO:0006355
Gabi4217g00029 438 Coils Coil 383 428 - -
Gabi4217g00029 438 Pfam bZIP transcription factor 360 412 IPR004827 GO:0003700|GO:0006355
Gabi4217g00029 438 SUPERFAMILY beta-sandwich domain of Sec23/24 206 273 - -
Gabi4217g00029 438 SMART brlzneu 356 421 IPR004827 GO:0003700|GO:0006355
Gabi4217g00029 438 Gene3D - 358 420 - -
Gabi4217g00029 438 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 438 IPR043452 GO:0003700|GO:0045893
Gabi4217g00029 438 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 358 409 IPR004827 GO:0003700|GO:0006355
Gabi4217g00029 438 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00029 Gabi-Chr4217 342992 348371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00029 19 438 bZIP Transcription Factor Family AT3G19290 50.463 3.92e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4217g00029 bZIP_1 4.8e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00029 K14432 - gmx:100819313 564.688