Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00021 ATGTGTTCCACAGCCGTTCTAAGAATTTCAGAATGTTTTATCAAGCCTCTGGCATCCACTGCGGAGTCAAACCATATCTGCAATTTAACATCTTGGGATATTGCTATGTTGTCTATGCAATACATCCAGAAGGGTCTCCTCTTCAACAAGCCACACAACCAACAAGATTTCATTGAGAATCTGTTGGATAAGCTCAAGCACTCCCTTTATCTCGCTCTTAACCATTTCTATCCATTGGCCGGTCGCCTTGTTACCCAAAAAACGCAAGACCCTCCCTCTTACGTTGTTTTCGTTGATTGCAGTAACAGTTCTGGAGCTAGATTTATCTATGCAACTTTGGACATGACCATATCCGACATCCTCTCCCCCGTTTACGTTCCACCGATTGTTCAGTCATTGTTTGATCTCGACAGAGCAATCAACCATGATGGTCACACCATGCCCTTGTTAGCCGTCCAAGTTACTGAACTAATTGATGGTGTTTTCGTAGGTTGTTCCATGAACCACACTATTGCTGATGGGACTTCTTTTTGGAATTTCTTCAATGCATGGTCTGAGATCTTTCAAGCCCAAGGGCAGCATGGGGATATTGATGTTCCCATTTCACGCCAACCCATTCACAATCGCTGGTTTCCAGAGGGTTGCGGTCAACTGGTCAATCTTCCTTTCAAACATCATGATGAGTTTATTATAAGATTTGAAGCACCCAAGCTCAGAGAGAGAATCTTCCACTTTTCATCTGAGTCTATAGCAATACTGAAAGCAAAGGCCAACTCAGAGTCCAATAGCACTGAAATCTCTTCATTCCAATCATTATCAGCACATGTTTGGAGATCCATAACTCGCGCGCGTTGCCTACCATATAATCAGAGAACCAGTTGCAATTTGGCCATAAACAATCGATCAAGAATGGAACCGCCTCTGCCTGACGAGTACTTTGGAAACTCAATTAATGTGGTGAATGAAGGGACAACAGCGGGGGAATTGATTGAACATGATCTAGGATGGGCAGCATGGAAGGTGCACCTGGCTGTTGCAAACCATAACGACAAAATGGTGAGACACAAGGTCAAAGAGTGGTTACAATCTCCTCTTGTCTACCAACTTGGTCTGCACTTTGATCCGTTCAGTGTTACCATGTCAAGTTCACCGAGGTTCAACATGTACGGCAATGAATTTGGAATGGGAAAAGCGGTAGCAGTTTTGAGTGGATGTGCCAACAAATTTGATGGGAGCGTGACAGCATACCAAGGATATGAAGGAGGGGGAAGCATAGATTTGGAAGTGTCCCTTTCATCTGATGCAATGAGAGCATTGGAATTGGATAAGGAGTTCATGAAGGCAGTTTCTGTGCCCAATCCCGTGTACTAG 1371 0.4406 MCSTAVLRISECFIKPLASTAESNHICNLTSWDIAMLSMQYIQKGLLFNKPHNQQDFIENLLDKLKHSLYLALNHFYPLAGRLVTQKTQDPPSYVVFVDCSNSSGARFIYATLDMTISDILSPVYVPPIVQSLFDLDRAINHDGHTMPLLAVQVTELIDGVFVGCSMNHTIADGTSFWNFFNAWSEIFQAQGQHGDIDVPISRQPIHNRWFPEGCGQLVNLPFKHHDEFIIRFEAPKLRERIFHFSSESIAILKAKANSESNSTEISSFQSLSAHVWRSITRARCLPYNQRTSCNLAINNRSRMEPPLPDEYFGNSINVVNEGTTAGELIEHDLGWAAWKVHLAVANHNDKMVRHKVKEWLQSPLVYQLGLHFDPFSVTMSSSPRFNMYGNEFGMGKAVAVLSGCANKFDGSVTAYQGYEGGGSIDLEVSLSSDAMRALELDKEFMKAVSVPNPVY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00021 456 Gene3D - 3 220 IPR023213 -
Gabi4217g00021 456 Pfam Transferase family 12 446 - -
Gabi4217g00021 456 Gene3D - 231 441 IPR023213 -
Gabi4217g00021 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 446 - -
Gabi4217g00021 456 FunFam Tryptamine hydroxycinnamoyl transferase 225 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00021 Gabi-Chr4217 244742 246452 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00021 17 440 Monolignol Biosynthesis Gene Families AT5G48930 27.803 4.02e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00021 - - gmx:100788297 698.738