Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00019 ATGATGATGGGTTCCCCTGTCGTTGAACACGTTTCAGAATGCTTCATCAAGCCGCAGCGCCCCAATGAAGAATCAAACAAAATCTGTTATTTAGCACCTTGGGATATTCTTATGCTGTCTACACACTACATCCAGAAGGGCCTCCTCTTCAAGAAACCTTCATCCCCACATAACCAACAAGATTTCATCCAGAATCTGTTGAATAAGCTCAAGCACTCCCTTTCTCTCACCCTCATCCATTTCTATCCATTGGCTGGTCGCCTAGTTACCCGCAAAACCCAAGACCCTCCCTCTCATGCTATTTTCGTTGATTGCAGTAACAGTCCCGGTGCTCGATTTATCTATGCAACTTTGGACATGACCATATCTGACATCCTCTCCCCCGTTGATGTTCCACCCATTGTTCAGTCATTGTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCCTTGTTGACCATCCAAGTCACTGAATTAGTTGATGGTGTTTTCCTAGGTTGCTCCATGAACCACACTATTGGTGATGGGGCTTCGTATTGGAATTTCTTCAATACATGGTCTGAGATTTTTCAAACTCAAGGGGATGATATTGATGTTCCCATTTCACGCCAACCCATTCACAATCGCTTGTTTCCTGAGGGTTGTGGTCCGTTAATCAATCTTCCCTTCAAACATCATGACGAGTTTATTAAAAGATCTGAAGCACCCGAGCTCAGAGAGAGAATGTTCCACTTTTCAGCAGAGTCTATAGCAAAACTGAAAGCAAAGGCTAACTCAGAGTACAATACCAACAAAATATCTTCATTCCAATCATTATCAGCACATGTTTGGAGATCCATAACACGTGCGCGCCGCGTACCATATGATCAGAGAACAACTTGCAAGTTGGCGACAAACAACCGATCGAGAATGGAGCCGCCTGTGCCGGAGGAATACTTTGGGAACTTAATTCATGCAGTGAGTGCAGAAGCGACGGCAGGGGAATTGCTCGAGAATGATCTTGGTTGGGCAGCGTGGAAGGTGCACATGGCTGTTGCAAACCATAACGACGGAGTGGTGCGGGAACTTGTTAAAGAGTGGTTAAAGTCTCCTTTCATCTATCAAATGGGTCTGTTCGTTGACCCCTACACTGTGCTGATGGGTAGTTCGCCGAGGTTCAACATGTACGGCAATGAATTTGGAATGGGGAAAGCGGTGGCACTCAGAAGTGGGTATGCCAACAAAATTGATGGGAAAACGACATCGTATCCGGGTCATGAAGGAGGAGGAAGCATAGATTTGGAAGTGTGCCTTTCGCCAGATACAATGAACTTGCTGGAATCAGATCAGGAATTCATGACTGCTGTATCAGTGTCCAATCCTCGGTGCTAG 1380 0.458 MMMGSPVVEHVSECFIKPQRPNEESNKICYLAPWDILMLSTHYIQKGLLFKKPSSPHNQQDFIQNLLNKLKHSLSLTLIHFYPLAGRLVTRKTQDPPSHAIFVDCSNSPGARFIYATLDMTISDILSPVDVPPIVQSLFDHHKAVNHDGHTMPLLTIQVTELVDGVFLGCSMNHTIGDGASYWNFFNTWSEIFQTQGDDIDVPISRQPIHNRLFPEGCGPLINLPFKHHDEFIKRSEAPELRERMFHFSAESIAKLKAKANSEYNTNKISSFQSLSAHVWRSITRARRVPYDQRTTCKLATNNRSRMEPPVPEEYFGNLIHAVSAEATAGELLENDLGWAAWKVHMAVANHNDGVVRELVKEWLKSPFIYQMGLFVDPYTVLMGSSPRFNMYGNEFGMGKAVALRSGYANKIDGKTTSYPGHEGGGSIDLEVCLSPDTMNLLESDQEFMTAVSVSNPRC 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00019 459 Gene3D - 9 219 IPR023213 -
Gabi4217g00019 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 450 - -
Gabi4217g00019 459 Pfam Transferase family 8 449 - -
Gabi4217g00019 459 Gene3D - 227 444 IPR023213 -
Gabi4217g00019 459 FunFam Tryptamine hydroxycinnamoyl transferase 227 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00019 Gabi-Chr4217 230966 232458 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00019 70 443 Monolignol Biosynthesis Gene Families AT5G48930 30.051 5.20e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00019 - - gmx:100787228 742.265