Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00017 ATGATGAGTTCCCCCGTAGTTCAACGCGTTTCGGAATGCTTCATCAAGCCGCAGCGCCCCACCGAAGAATCAAACCGAATCTGCTATTTAGCACATTGGGATATTCTTTGGCTGTCTACACACTACATCCAGAAGGGCCTCCTCTTCAAGAAACCCACATCCCCACACAACCAACAAGATTTCATTGAGAATCTGTTGGATAAGCTCAAGCACTCCCTTTCTCTCGCTCTTGTCCATTTCTATCCATTGTCTGGTCGCCTTGTTACCCACAAAACCCAAGACCCTCCCTCTTATGTTGTTTACGTTGATTGCAATAACAGTCCCGGAGCTAGATTTATTTATGCAACTTTGGACTTGACCATATCTGACATACTCTCCCCCGTTTATGTTCCACCCATTGTTCAGTCATTGTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCCTTGTTGACCATCCAAGTCACTGAATTAGTTGATGGTGTTTTCCTAGGTTGCTCCATGAACCACATTCTTGGTGATGGGACTTCGTATTGGAATTTCTTCAAGACATGGTCTCAGATTTTTCAAACTCAAGGGGATGATGTTCCTGTTCCCATTTCACGCCATCCCATTCACAATCGCTGGTTTCCAGAGGGTTGCGGTCAATTAATCAATCTTCCCTTCAAACATCATGATGAGTTTATTAGTAGATATGAAGCACCCAAGCTCAGAGAGAGAATCTTCCACTTTTCAGCAGAATCTATAGCAAAACTGAAAGCAAAGGCGAACTCAGAGTCCAATACTACCGAAATCTCTTCATTCCAATCATTATCGGCGCATGTTTGGAGATCCATAACACGTGCGCGCCGCCTACCATATGATCAGAGAACTACTTGCAAGTTGGCGACAAATAACCGATCGAGAATGGAGCCGCCTGTGCCGGAGGAATACTTTGGGAACTTAATTCAAGCAGTGAGTACAGAAGCGACGGCAGGGGAATTGCTTGAGAATGATCTTGGTTGGGCAGCATGGAAGGTGCACATGGCCGTTGCAAACCATAACGACGGAGTGGTGCGGGAAATGGTTAAAGAGTGGGTAAAGTCTCCTGTCATCTATCAAATGGATCTGTTCATGGACCCGTACACTGTGCTGATGGGTAGTTCACCGAGGTTCAACATGTATGGCAATGAATTTGGAATGGGGAAAGCGGTAGCACTCAGAAGTGGGTATGCCAACAAAGTTGATGGGAAAGTGTCATCATATCCGGGTCATGAAGGAGGAGGAAGCATAGATTTGGAAGTGTGCCTTTTGCCAGATAGAATGAATTTGCTGGAATCTGATCAGGAATTCATGAATGCAGTATCATTGTCCAATCCTCTGTGCTAG 1377 0.4546 MMSSPVVQRVSECFIKPQRPTEESNRICYLAHWDILWLSTHYIQKGLLFKKPTSPHNQQDFIENLLDKLKHSLSLALVHFYPLSGRLVTHKTQDPPSYVVYVDCNNSPGARFIYATLDLTISDILSPVYVPPIVQSLFDHHKAVNHDGHTMPLLTIQVTELVDGVFLGCSMNHILGDGTSYWNFFKTWSQIFQTQGDDVPVPISRHPIHNRWFPEGCGQLINLPFKHHDEFISRYEAPKLRERIFHFSAESIAKLKAKANSESNTTEISSFQSLSAHVWRSITRARRLPYDQRTTCKLATNNRSRMEPPVPEEYFGNLIQAVSTEATAGELLENDLGWAAWKVHMAVANHNDGVVREMVKEWVKSPVIYQMDLFMDPYTVLMGSSPRFNMYGNEFGMGKAVALRSGYANKVDGKVSSYPGHEGGGSIDLEVCLLPDRMNLLESDQEFMNAVSLSNPLC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00017 458 Gene3D - 9 226 IPR023213 -
Gabi4217g00017 458 Gene3D - 228 443 IPR023213 -
Gabi4217g00017 458 Pfam Transferase family 10 448 - -
Gabi4217g00017 458 FunFam Tryptamine hydroxycinnamoyl transferase 226 445 - -
Gabi4217g00017 458 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00017 Gabi-Chr4217 220402 221778 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00017 49 442 Monolignol Biosynthesis Gene Families AT5G48930 29.808 2.98e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00017 - - gmx:100787228 734.947