Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4217g00015 | ATGGGAAGCATGAAGGTGCATCAGTTCGCACGTGGATTCTGGGAGCACGAACCCTCCCTCACGCTTGGGTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTTCCCAACACCTCCGACAACACCACTCCTTCTGTTCCTTTCGATCTCAAGAGCTTCATCAGACCAGAAAGTGGCCCCAGAAAACTCTTATCCTCTGACGATAATAAGAAAGATCCACCTTCACCCCAGGGCCAGGTGGAAACGCATCCAGGAGGGACACGGTGGAATCCGACGCAAGAACAAATAGGCATACTGGAGATGCTATACAGAGGAGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACAGCTCAGCTTAGCAAGTACGGTAAGATCGAAGGTAAAAACGTGTTCTATTGGTTTCAAAACCACAAAGCACGAGAGAGACAAAAGCAGAAGCGCAACACCCTTGGCCTTTCTCATAGTCCTCGAACTCCCACAATTCATAGTATAACTAATTTGGAAACGACAAGGGGGGAAGTAATAGAAAGAGAAGAGGAAGATAGTCCGTACAAGAAGTGTAGGAGATGGGGATTTGAGTGCTCGGAAGAACAAAGCGTGTTATCTTGTGAAGAGGAGGAGGAACATAGAACTCTGGAGCTATTTCCATTGCACCCTGAAGGAAGATGA | 675 | 0.483 | MGSMKVHQFARGFWEHEPSLTLGCKRLRPLAPKLPNTSDNTTPSVPFDLKSFIRPESGPRKLLSSDDNKKDPPSPQGQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLSHSPRTPTIHSITNLETTRGEVIEREEEDSPYKKCRRWGFECSEEQSVLSCEEEEEHRTLELFPLHPEGR | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4217g00015 | 224 | MobiDBLite | consensus disorder prediction | 69 | 90 | - | - | |
Gabi4217g00015 | 224 | Gene3D | - | 85 | 152 | - | - | |
Gabi4217g00015 | 224 | SMART | HOX_1 | 83 | 150 | IPR001356 | GO:0003677 | |
Gabi4217g00015 | 224 | Pfam | Homeodomain | 86 | 145 | IPR001356 | GO:0003677 | |
Gabi4217g00015 | 224 | PANTHER | WUSCHEL-RELATED HOMEOBOX 4 | 4 | 224 | IPR044186 | GO:0003700|GO:0010067|GO:0010087|GO:0051301 | |
Gabi4217g00015 | 224 | MobiDBLite | consensus disorder prediction | 32 | 90 | - | - | |
Gabi4217g00015 | 224 | CDD | homeodomain | 86 | 147 | IPR001356 | GO:0003677 | |
Gabi4217g00015 | 224 | FunFam | WUSCHEL-related homeobox 4 | 85 | 152 | - | - | |
Gabi4217g00015 | 224 | SUPERFAMILY | Homeodomain-like | 82 | 150 | IPR009057 | - | |
Gabi4217g00015 | 224 | ProSiteProfiles | 'Homeobox' domain profile. | 81 | 146 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4217g00015 | Gabi-Chr4217 | 203569 | 204702 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4217g00015 | 4 | 152 | Wox Gene Family | AT1G46480 | 66.049 | 1.52e-66 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-WOX | Gabi4217g00015 | Homeodomain | 5.3e-19 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4217g00015 | - | - | gmx:100781015 | 384.8 |