Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00015 ATGGGAAGCATGAAGGTGCATCAGTTCGCACGTGGATTCTGGGAGCACGAACCCTCCCTCACGCTTGGGTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTTCCCAACACCTCCGACAACACCACTCCTTCTGTTCCTTTCGATCTCAAGAGCTTCATCAGACCAGAAAGTGGCCCCAGAAAACTCTTATCCTCTGACGATAATAAGAAAGATCCACCTTCACCCCAGGGCCAGGTGGAAACGCATCCAGGAGGGACACGGTGGAATCCGACGCAAGAACAAATAGGCATACTGGAGATGCTATACAGAGGAGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACAGCTCAGCTTAGCAAGTACGGTAAGATCGAAGGTAAAAACGTGTTCTATTGGTTTCAAAACCACAAAGCACGAGAGAGACAAAAGCAGAAGCGCAACACCCTTGGCCTTTCTCATAGTCCTCGAACTCCCACAATTCATAGTATAACTAATTTGGAAACGACAAGGGGGGAAGTAATAGAAAGAGAAGAGGAAGATAGTCCGTACAAGAAGTGTAGGAGATGGGGATTTGAGTGCTCGGAAGAACAAAGCGTGTTATCTTGTGAAGAGGAGGAGGAACATAGAACTCTGGAGCTATTTCCATTGCACCCTGAAGGAAGATGA 675 0.483 MGSMKVHQFARGFWEHEPSLTLGCKRLRPLAPKLPNTSDNTTPSVPFDLKSFIRPESGPRKLLSSDDNKKDPPSPQGQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLSHSPRTPTIHSITNLETTRGEVIEREEEDSPYKKCRRWGFECSEEQSVLSCEEEEEHRTLELFPLHPEGR 224
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00015 224 MobiDBLite consensus disorder prediction 69 90 - -
Gabi4217g00015 224 Gene3D - 85 152 - -
Gabi4217g00015 224 SMART HOX_1 83 150 IPR001356 GO:0003677
Gabi4217g00015 224 Pfam Homeodomain 86 145 IPR001356 GO:0003677
Gabi4217g00015 224 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 224 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Gabi4217g00015 224 MobiDBLite consensus disorder prediction 32 90 - -
Gabi4217g00015 224 CDD homeodomain 86 147 IPR001356 GO:0003677
Gabi4217g00015 224 FunFam WUSCHEL-related homeobox 4 85 152 - -
Gabi4217g00015 224 SUPERFAMILY Homeodomain-like 82 150 IPR009057 -
Gabi4217g00015 224 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4217g00015 Gabi-Chr4217 203569 204702 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00015 4 152 Wox Gene Family AT1G46480 66.049 1.52e-66 202
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi4217g00015 Homeodomain 5.3e-19 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00015 - - gmx:100781015 384.8