Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4217g00009 ATGGAAGCAGGGGAAGATTGTTGCGTGAAGGTTGCGGTCAATGTTCGGCCACTCATCGCCGACGAGAAACTTCAAGGCTGCAAAGATTGTGTCACCGTCGTACCTGGGAAGCCTCAGGTACAAATTGGCGCCCACTCCTTTACATTTGATCATGTTTATGGAAGCACTGGTTCTCCCTCGTGTGCCATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTCGCTTATGGCCAGACAGGCTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGCCAAACAGGAATAGTCCCCCAAGTTATGAACGTTTTGTTCAACAAAATTGGAACCTTAAAGCACCAGATTGAATTTCAGTTGCACGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCCTCCTCTATGAGCAAACCAGAAACTGTAAATGGACATGCAGGAAAAATTACATCTCCTGGGAAGCCACCAATACAAATACGTGAGACATCAAATGGTGTCATTACCCTTGCAGGATCTACTGAAGTCAGTGTCACAACACTAAAAGAAATGGCTGCTTGCCTGGAACAGGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCATGCCATCTTCACCATCACTTTAGAGCAAATGCGGAAGGTGAACAGTCCTAGTGACAACTGTTTAAATGATATCATGAATGAAGAGTATCTCTGTGCCAAGTTGCACTTAGTGGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGTTCTAATGGTTTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGCGTTCATGTTCCATATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGAGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTAAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATTAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTGGAGTATTTGCAGGCAGAACTTTGTGCTCGTTCTGGCGGCTCCTCAGAGGAAGTTCAGGTCCTTAAGGAAAGGATTGCTTGGCTTGAAGCTTCTAATGAAGATCTTTGCCGTGAACTTCATGAGTACCGTAGTAGATGCTCTATTGTACAACAATGTGAAAAGGATGCTTATGATGGTAGCACATGCGGCGTGAAGACTGATGGGCTTAAGAGGAGCTTACCTGTCATAGCAGCTGATTATCCAATGAGTGAAACAGCAGGGTACCAATTGCCAATTTTAGGAGGTGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAGAATCTGATGCTGAAGTACTCAAGCAACATTTCGGAAGGAAGATAATGGAACTAGAGGATGAGAAGAGAGTTGTGCAGAGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAAATTGAAAGCACTTGAAGCACAGATTCTGGATCTGAAGAAGAAACAAGAGAGCCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTCCATAAAGGCCCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAAGCGGAACAGTTTCGGCAGTGGAAGGCTTCTAGAGAAAAGGAGCTGTTGCAATTAAGGAAGGAGGGAAGAAGAAATGAGTATGAAAGGCATAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTCCTTCAGAGAAAAACTGAAGAAGCTGCGATGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCTCGAAAAACATCAACTCGAGACACGTTAGTTACAATGAATGGAAGTGGAACGAATGGGCAGAGCAATGAGAAGTCCTTACAACGTTGGCTTGATCACGAACTAGAAGTTATGGTAAAAGAGCATGAAGTTCGTTTTGAGTACGAGAAACAGAGCCAAGTGCGAGCAGCCCTTGCAGAGGAGTTAGCCATGCTTAAGCAAGTAAACGAGTTTGCTGCTAAGGGTCTCAGTCCTCCGAGAGGAAAGAACGGATTTGCCAGGGCATTGTCCATGCCACCAAACGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTCAGCATATCGTCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCCGAGGCAGAAGAAAGAGAGCGGGCCTTCACTAATCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCAATCTCTGGGAGAAGGACATGGAGATCAGGGAAATTAAAGATCAAATAAAAGAACTTGTTGGTCTATTACGGCAAAGTGAGATGAAGAGAAAGGAAGTTGAGAAGGAGCTAAAAGTGAGAGAGCAAGATGCTGCAACAGCATTGGCTACACCAGCTTCTGGAAACTCTCCAAATTCATTGAAACACTATGAAGACATGAAGGGATCTCCAGTGTCTGTGCCAGTACCAAAACAGCTGAAATATGCGCCAGGGGTTGCTAATGGCTTAGTGAGGGAATCGGCAGCATTTGTAGATCAGGGTAGAAGAATGATACCCATCGGGCAGCTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGCTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTTCTACAATTCAAGTGGAAGTGGCAGAAACCATGGAGACTTTCAGAATTGATTCGACACAGTGATGAGACAATCATGAGAGCAAGGCCTCGCTCACAGGCTTTGCCACGTGTCATGTGA 3102 0.4358 MEAGEDCCVKVAVNVRPLIADEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSTGSPSCAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIVPQVMNVLFNKIGTLKHQIEFQLHVSFIEILKEEVRDLLDPSSMSKPETVNGHAGKITSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKVNSPSDNCLNDIMNEEYLCAKLHLVDLAGSERAKRTGSNGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARSGGSSEEVQVLKERIAWLEASNEDLCRELHEYRSRCSIVQQCEKDAYDGSTCGVKTDGLKRSLPVIAADYPMSETAGYQLPILGGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGESDAEVLKQHFGRKIMELEDEKRVVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSTRDTLVTMNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRGKNGFARALSMPPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCNLWEKDMEIREIKDQIKELVGLLRQSEMKRKEVEKELKVREQDAATALATPASGNSPNSLKHYEDMKGSPVSVPVPKQLKYAPGVANGLVRESAAFVDQGRRMIPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSELIRHSDETIMRARPRSQALPRVM 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4217g00009 1033 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1022 IPR027640 GO:0003777|GO:0007018
Gabi4217g00009 1033 Pfam Kinesin motor domain 36 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4217g00009 1033 Coils Coil 403 423 - -
Gabi4217g00009 1033 Coils Coil 531 565 - -
Gabi4217g00009 1033 Coils Coil 498 525 - -
Gabi4217g00009 1033 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4217g00009 1033 FunFam kinesin-like protein KIN-4A isoform X1 2 391 - -
Gabi4217g00009 1033 Gene3D Kinesin motor domain 2 391 IPR036961 -
Gabi4217g00009 1033 Coils Coil 574 646 - -
Gabi4217g00009 1033 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi4217g00009 1033 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4217g00009 1033 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4217g00009 1033 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4217g00009 1033 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4217g00009 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Gabi4217g00009 1033 CDD KISc_KIF4 7 364 - -
Gabi4217g00009 1033 MobiDBLite consensus disorder prediction 151 174 - -
Gabi4217g00009 1033 Coils Coil 869 903 - -
Gabi4217g00009 1033 Coils Coil 679 699 - -
Gabi4217g00009 1033 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4217g00009 Gabi-Chr4217 127154 139651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4217g00009 9 409 Calmodulin-binding Proteins AT5G65930 32.840 3.61e-54 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4217g00009 - - gmx:100802585 1845.09