Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4215g00001 ATGGCATCATCAAATTCACCATGTGCAGCATGCAAGTTTCTGCGGCGCAAATGCCAGCCAGAGTGTGCATTTGCACCATACTTCCCACCTGATCAGCCTCAAAAGTTTGCAAATGTTCATAGAATTTTTGGGGCAAGCAATGTCACAAAGCTTCTCAATGACTTGCACCCTCACCAACGTGAAGATGCTGTCAATTCCCTTGCTTATGAAGCTGAGATGAGGCTCCGTGACCCTGTCTATGGCTGTGTTGGAGTCATCTCTCTCCTTCAACACCAACTTCGCCAGCTCCAAATGGATCTTTATTGTGCCAAATCCGAACTCTCTAGGTACCAAAACTTGAGCATCACCACCAACCACGGCCTCATAACAGCAGAATCTGCTGCTACTACTTACCACCACCCGCAGAACGCAGGTGGTGGTAATAACCGTGATCACCACTACCATCATCACCATCATCAGTTCTTTCCAAGGGAGCAGTACCAACAACAAATGGTTAGAAGCTTTGATGCAGGGAACAATTATGATGCTAGTCTCTTGGCCATGAACATATCTGCTAGCTTAGGGCAACTCAATCAGCTTCAACCTGCTAGCGGGGGTGATGACCGCCGCGCTGTCAACCGCTCTTAG 627 0.4817 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNHGLITAESAATTYHHPQNAGGGNNRDHHYHHHHHQFFPREQYQQQMVRSFDAGNNYDASLLAMNISASLGQLNQLQPASGGDDRRAVNRS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4215g00001 208 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gabi4215g00001 208 MobiDBLite consensus disorder prediction 131 153 - -
Gabi4215g00001 208 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 150 - -
Gabi4215g00001 208 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4215g00001 Gabi-Chr4215 16280 16906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4215g00001 2 208 AS2 family AT1G65620 64.115 6.55e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi4215g00001 LOB 2.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4215g00001 - - gmx:100806890 347.821