Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00082 ATGTTTCAGTGCATGATCCCGTGTGCCAAGCCAACCGCTGTTGATGGGGATGAAGATGTCCGTGGGAATGGAACGCCGAACACAAAAGAAGCCGTCAAGGGTCTGACTTCGCAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAAGTATGACACCGTTTCTGAAGGGGGGGTTCCACACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTACGACAGGATCAGGGAGCTTCATAATATCCAGACTTTAAATCAACATGTTTCCAACACTCCTGCAAGGTCTGATGATGATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACACGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACGTGGATGCTGAATGGGTTGAGCAGGACGATCCTGGAGTGTTAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGTTGGTACTGTTTCGTAAGTTTAAGTTTGTGGTGTCTCTGTTTACTCCAATTACTGTGGGGTATATTGCTGTTGATTTATCTTTGGTTGAACAATTGCGCAAGCTTGTGAAAACCCTATCTGTTGATGCTTATGTATATGTGGAGTGCTGA 1029 0.4888 MFQCMIPCAKPTAVDGDEDVRGNGTPNTKEAVKGLTSQIKDLALKLSGKKIKGGTSESIKYDTVSEGGVPHGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPTGGNDLKRIRFCRDMFDKSRAQRWWAENYDRIRELHNIQTLNQHVSNTPARSDDDENSGESEQDIPMASMLNTDSTPGNFHAPAGNMGYFHGGISRANNPTDNDVDAEWVEQDDPGVLITVKRSANGTRQIRRIKFSREIFDADAAKDWWLRNRLVLFRKFKFVVSLFTPITVGYIAVDLSLVEQLRKLVKTLSVDAYVYVEC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00082 342 MobiDBLite consensus disorder prediction 182 202 - -
Gabi4206g00082 342 Pfam Transcription factor regulating root and shoot growth via Pin3 121 175 IPR013591 -
Gabi4206g00082 342 Pfam Transcription factor regulating root and shoot growth via Pin3 246 299 IPR013591 -
Gabi4206g00082 342 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 293 IPR044532 -
Gabi4206g00082 342 ProSiteProfiles BRX domain profile. 121 176 IPR013591 -
Gabi4206g00082 342 ProSiteProfiles BRX domain profile. 246 301 IPR013591 -
Gabi4206g00082 342 Pfam Transcription factor BRX N-terminal domain 25 48 IPR027988 -
Gabi4206g00082 342 MobiDBLite consensus disorder prediction 81 105 - -
Gabi4206g00082 342 MobiDBLite consensus disorder prediction 72 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4206g00082 Gabi-Chr4206 764384 767342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00082 1 293 Major Intrinsic Protein MIP AT1G31880 45.029 1.87e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00082 - - jre:109004022 268.47