Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00080 ATGAGCGTTCCTCCGCCGCCGGTGATGTGGACGGCGACTCAGCCGCCGTTCACGATGGCGCAGTGGCAGGAGCTGGAGCACCAAGCTCTCATCTTCAAGTACCTCAAGGCTGGTTTGTCGGTTCCCCCAGACCTCCTCGTACCCATTCGGAAAAGCCTACAATTGATGTCTCACCACCACCACCACCACCACCCATCTTTGGGTTATTATGGGAAGAAGATAGACCCAGAACCTGGTAGGTGCAGAAGAACCGATGGGAAGAAGTGGAGGTGCTCAAGGGATGCTCACCCTGACTCCAAGTATTGTGACCGCCACATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCAACCTTCTCCTTCTTCTTCTTCATCTTCTCCCCTTGATGCCACAACTGGAAGCACAACTACTGCCTCTGCTTCTGCAACTGGAACCTTCCACACTCTCCCCTTGCACACCGATGGTACTCGTGAAGGTTTCACTTTCACACTTGGGAATACCACCAACACACTACCCCACCTTCACATGAACACACTGCCTCTTTCCGGTGAGGGTAGCAAGAAAGCTTACAGGTTTGGACTGGACTCCGAAGCAGATGAGCAAAACGCCTTACAGAAAGATCTGGGAAGTGTGAGATATCAAGGTTATGACTTTACCTCAGATAGCATGTGGTCTCATTTGTCTCAGGTTCCGTCAAACACTGTTTCAGAATCAAGGAGTGCTTCTACCATGGTTGGCAACTGCTTCCAACAGCGAACAATGCGAGATGCTGAGCTGTTGAACCTCGACGCTGCAAGGTCCAAGGAGCTTGTCTTCAGTGGTCAGTTAAGTTCAGCAGGGGGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGCACTGGAAGAAGGATTTAGGTTCATCTGCCATTGAGTATAGGCCCAACAAGGATTTTAACTGCAACCCAGATGTCAATGTTGATTCCAATGGTTCTTTATAA 1005 0.4985 MSVPPPPVMWTATQPPFTMAQWQELEHQALIFKYLKAGLSVPPDLLVPIRKSLQLMSHHHHHHHPSLGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPQPSPSSSSSSPLDATTGSTTTASASATGTFHTLPLHTDGTREGFTFTLGNTTNTLPHLHMNTLPLSGEGSKKAYRFGLDSEADEQNALQKDLGSVRYQGYDFTSDSMWSHLSQVPSNTVSESRSASTMVGNCFQQRTMRDAELLNLDAARSKELVFSGQLSSAGGLKQEYQSPQSLFSDWHWKKDLGSSAIEYRPNKDFNCNPDVNVDSNGSL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00080 334 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Gabi4206g00080 334 MobiDBLite consensus disorder prediction 117 155 - -
Gabi4206g00080 334 MobiDBLite consensus disorder prediction 61 157 - -
Gabi4206g00080 334 Pfam QLQ 16 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi4206g00080 334 MobiDBLite consensus disorder prediction 75 105 - -
Gabi4206g00080 334 SMART QLQ_2 15 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi4206g00080 334 ProSiteProfiles QLQ domain profile. 16 51 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gabi4206g00080 334 PANTHER GROWTH-REGULATING FACTOR 5 15 301 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gabi4206g00080 334 Pfam WRC 76 118 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4206g00080 Gabi-Chr4206 733376 736559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00080 11 118 GRF Transcription Factor Family AT3G13960 57.018 8.56e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gabi4206g00080 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00080 - - gmx:100809947 498.434