Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00067 ATGGAGAATGGTGGCGGAGGTTATAATGGGGTGGTGATGACGATGACGAGAGACCCAAAGCCGAGGCTGAGGTGGACAACTGATCTTCACGACCGGTTTGTGGACGCCGTCACAAAGCTTGGTGGTCCTGACAAGGCGACTCCCAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGTTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGGCAGCAGGCTCGAAAACAAAATGAAGAACAGCACAAAGAGAATAAGAGATGTTCGTATGTAAATTTCAGTGATCTTTCTTCAGAACCTAACACCAGTTACAGAGGTGATACTGAATGCGGAGAAATCCCAGTAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGGTTAGAAGAGCAGCTCGAGGTGCATAAGAAATTGCAGATGAGAATAGAGGCCCAAGGGAAGTATTTGCAAACCGTGTTAGAGAAAGCTCGGAGGACCCTTTCCCTGGATGGACCGGGCAGTCTTGAAGCATCAAGAGCTCAATTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGACGTGAATGATTTCTATAATAAGAGCCATGTCTCAGCTTTCCATTATCAAGAAGTAGGAAGTGAAGAAAATAAGGATCAAAAGCCTAAGGTTGAAGGGGGTTCAGTACAGTTTGACTTAAACATCAAAGGTAGTAATGACCTTGTATCCGCAGGTGGAGCTGAAATGGAAGCCAAGATGCTTTCATATAGGATATAA 807 0.4275 MENGGGGYNGVVMTMTRDPKPRLRWTTDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEEQHKENKRCSYVNFSDLSSEPNTSYRGDTECGEIPVAEALRHQIEVQKRLEEQLEVHKKLQMRIEAQGKYLQTVLEKARRTLSLDGPGSLEASRAQLTEFNSALSNFMENMNKDSKENIIDVNDFYNKSHVSAFHYQEVGSEENKDQKPKVEGGSVQFDLNIKGSNDLVSAGGAEMEAKMLSYRI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00067 268 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 206 IPR044848 GO:0003700
Gabi4206g00067 268 Pfam Myb-like DNA-binding domain 23 73 IPR001005 -
Gabi4206g00067 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Gabi4206g00067 268 Coils Coil 130 150 - -
Gabi4206g00067 268 Gene3D - 19 77 - -
Gabi4206g00067 268 Pfam MYB-CC type transfactor, LHEQLE motif 118 163 IPR025756 -
Gabi4206g00067 268 FunFam Myb family transcription factor 19 77 - -
Gabi4206g00067 268 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Gabi4206g00067 268 SUPERFAMILY Homeodomain-like 20 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4206g00067 Gabi-Chr4206 634409 638383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00067 5 189 G2-like Transcription Factor Family AT3G24120 52.709 1.83e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4206g00067 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00067 - - gmx:100810146 460.685