Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00056 ATGGCAGCTTGTACTGTCTACTCAACACAATCTCTAAGCACAAATTGCTCCATCTCAACCCCATCAAAAACACATGTAGGTTTTCACCAAAGACAAGTATTTTTCTACACAACAAGCAAGAGAAGCAGCAAGAGAGGGAGTAACACTAGCAGCCCTTATGTGATAACATGTGCAGCGGGTGATTCACAGACAGTGGTGATTGGTCTAGCTGCTGACTCTGGGTGTGGTAAGAGTACTTTCATGAGGAGGCTCACAAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAGGGTGGAAACCCAGATTCAAACACTCTCATCAGTGACACAACCACTGTGATATGTTTGGATGATTACCATTCATTGGATAGAACTGGTAGAAAAGAGAAGGGAGTCACTGCACTTGATCCGAGAGCCAACAATTTTGATCTCATGTATGAACAAGTTAAAGCTATTAAAGATGGAATTGCTGTTCAAAAACCCATTTACAACCATGTCACTGGTCTTTTGGATCCTCCAGAGCTTATTAAACCTCCCAAAATCTTAGTCATTGAAGGTTTGCACCCAATGTTTGACCCTCGGGTCAGAGAACTCTTGGACTTTAGCATCTACTTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACATAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTTTATCGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACACAACTCATTCCAGATGATAATGAGGGGAAGATTTTAAGAGTCAGGTTGATACAGAAAGAGGGGGTTAAATACTTTAGCCCAGTTTACTTGTTTGATGATGGCTCTACCATTTCATGGATACCATGTGGAAGGAAGCTTACATGCTCTTATCCTGGCATCAAATTCTTCTATGGACCAGAGAGTTACTTTGGAAATGAGGTGTCAGTTGTAGAAATGGATGGGCAATTTGACAGATTAGATGAACTAATATACGTTGAGAGCCACCTAAGCAACCTCTCTACAAAGTTCTATGGAGAGGTTACTCAACAAATGTTGAAGCATGCTGATTTCCCAGGTAGCAACAATGGAACAGGTCTATTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATATGAACAGATAGTAGCAAGCAGGGCTGGGAGTCCAGTAGGAGCAGCAAAAGCTTAG 1233 0.4185 MAACTVYSTQSLSTNCSISTPSKTHVGFHQRQVFFYTTSKRSSKRGSNTSSPYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAIKDGIAVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPESYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIVASRAGSPVGAAKA 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00056 410 FunFam Phosphoribulokinase 61 291 - -
Gabi4206g00056 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 335 IPR027417 -
Gabi4206g00056 410 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Gabi4206g00056 410 CDD PRK 66 355 - -
Gabi4206g00056 410 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gabi4206g00056 410 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gabi4206g00056 410 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gabi4206g00056 410 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gabi4206g00056 410 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gabi4206g00056 410 PANTHER URIDINE KINASE 48 299 - -
Gabi4206g00056 410 Gene3D - 61 296 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00056 118 292 PRT Gene Family AT3G27440 25.843 6.05e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00056 K00855 - qsa:O6P43_033385 757.288