Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00033 ATGGGTTACGAAGATCATCCGTATCGCGACGAAGACGGAGAACCGTTGATGGACTTCGACGAAGTTCAATCGGATCGCGAGGCGTCTCCGGAACCTCAGCAGCTCGACGATTTCGAGGATGACGTGGACGATTGGCGCGGTCGGGATCGGTCGCAGACTCCGGTGTACGACACCGATCCATCAAGGTCGAAGCCGAGGAAGAGGCTCATCAAGAAGAGTGATGCCGGAAAGCAGTCAGTGGCGCCGGAGCTCTACGATGAGGAGGTGGAGGAAGAGGATAATGTTCCGGCGAGGTCTGAGGATGGGGGTGTGAGGAAGAGGAAGAAGGGGAAGGATGGTGGCGGTGGCAGTGGCAGTGGGAAGAAGGAGAAGAGGCTTAAGGGGGAGAAGAGGTTTGGAAGTAGTAGCGGTGGAAAGGGCGCGGGGTCTAAATTTGGGGTTTCGAAGAAAGGGTTTGGTGGGAAGGCTGGGAAGGATCACGATGGCGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGGGATTCTGAGGATGATCACGACGGTGACAGGAATGTTGATGATGACAACTTCATAGATGACACTGGAGTGGAACCTGCTTATTATGGAAGTGACAATGAGCCTCGTTCTCCTGGTGATGCTCCCCAGGCAGAGGAAGGTGAAGAGGATGAAGAAATCAAGGATCTTTTCAAGATAGGTAAGAAAAGGAAGAAGAATGAGAGAAGTCCTGCAGAAATAGCTTTGTTAGTTGAAAATGTCATGGCTGAGCTTGAGGTTACGGCTGAAGAGGATGCTGAACTTAATAGACAGGCGAAGCCTGCTATTAATAAACTCAAGAAGTTGCCTCTTCTTACAGAAGTCCTCTCAAAGAAACAGCTTCAACTAGAATTTTTAGATCATGGAGTGTTAACTTTATTGAAGAATTGGCTTGAGCCACTGCCTGATGGAAGCTTGCCAAATATAAACATACGCACGGCAATTTTGAAGATTTTGAATGATTTTCCTATAGACCTAGAACAGTATGATAGAAGAGAACAACTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTATCGAAGTCCGATGAAGAAATCAGTGTAAATAGGAAACTAGCCAAGGATCTGGTTGATAAATGGAGCCGGCCTATATTTAATAAGAGTACACGGTTTGAAGACATGAGAAATATTGAGGATGATAGGGTTCCTTTCAGAAGGCCATTGGTTAAAAAACCGGCAAATAAAGCTGCAGGAATGGAATCTAGAGACAGTGATCTTGATTTGGAACTTTCGCAGCCTAGGTCTGGCCAGTCCTCTTCCAGGCAACATGCATCAAGGCCAGAGGCAACACCTTTAGATTTTGTGATCCGTCCTCAATCTAAAATTGATCCAGAAGAAGTTAGAGCACGAGCAAAACAAGCTGCTCAAGATCAGCAGCGTATGAAGATGAATAAGAAGTTACAGCAGCTGAGGGCACCAAAAAAGAGGCAGCTTCAGGCTACAAAACTGAGCGTGGAAGGTCGTGGCATGATCAAATATTTGTAA 1545 0.466 MGYEDHPYRDEDGEPLMDFDEVQSDREASPEPQQLDDFEDDVDDWRGRDRSQTPVYDTDPSRSKPRKRLIKKSDAGKQSVAPELYDEEVEEEDNVPARSEDGGVRKRKKGKDGGGGSGSGKKEKRLKGEKRFGSSSGGKGAGSKFGVSKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDHDGDRNVDDDNFIDDTGVEPAYYGSDNEPRSPGDAPQAEEGEEDEEIKDLFKIGKKRKKNERSPAEIALLVENVMAELEVTAEEDAELNRQAKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKDLVDKWSRPIFNKSTRFEDMRNIEDDRVPFRRPLVKKPANKAAGMESRDSDLDLELSQPRSGQSSSRQHASRPEATPLDFVIRPQSKIDPEEVRARAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMIKYL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00033 514 Coils Coil 250 270 - -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 459 475 - -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 153 191 - -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 41 64 - -
Gabi4206g00033 514 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 299 387 IPR035441 -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 408 495 - -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 1 33 - -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 1 225 - -
Gabi4206g00033 514 Pfam TFIIS helical bundle-like domain 329 384 IPR017923 -
Gabi4206g00033 514 ProSiteProfiles TFIIS N-terminal domain profile. 304 387 IPR017923 -
Gabi4206g00033 514 PANTHER PROTEIN IWS1 HOMOLOG 1 1 514 IPR044204 GO:0009742|GO:0032784
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 430 446 - -
Gabi4206g00033 514 MobiDBLite consensus disorder prediction 96 132 - -
Gabi4206g00033 514 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 243 390 IPR035441 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gabi4206g00033 Med26 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00033 K17498 - gmx:100801805 774.237