Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00028 ATGGGCAGCAGTGAAATGGACAAAGCCCCAAAAGAGAAGGAGTCAAAGACGCCGCCACCTACATCACAGGAACAGTCTTCAACCACCAACACTGGAACAATTAATCCTGATTGGTCCAGCTTTCAGGCATACTCTCCTATGCCTCCACATGGGTTCTTGGCATCAAGTCCCCAAGCTCACCCTTATATGTGGGGTGTCCAGCATATTATTCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCAATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAACGGGATTGCTGAGGCTTCAGGAAATACTCCTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAACGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAAAATAATGAACATGGTAAAACACAAGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTCAATTGAAATCAGGGGGCAGGCAGGATTCTTTTGAAGATGAACCATCTCAGAATGGCAGTTCGGTGCATACTCAAAATGGGGGACTTAATACACCTCATACTGTGGTTAATCAAACTATGTCTGTCATACCTATGTCTGCCAGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCATCCAACATCCCTGCACTGCGTGGAAAGGTTCCATCTACTGCAGTTGCTGGAGGGATGGTTACTGCTGGATCGCGGGATAGTGTTCAGTCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGTAAGCAGTCTAACAGGGAATCTGCTCGCAGGTCCAGGTTGCGCAAGCAGGCCGAGTGTGATGAGCTAGCTCAGCGTGCTGATGTTTTGAAAGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAGTCGTATCAGGAGTGAGTATGAGCAGCTACTCTCTGAGAATGCAGCTCTCAAGGAGAGACTTGGGGAACTACCTGGGAACGATGATGTTAAGTCTGGCAGGAATGATCAGCATGTGGGTAATGACACTCAACAGAGTGATGAGACAGAGGCTGTGCAGGGTGCTCATTAG 1227 0.467 MGSSEMDKAPKEKESKTPPPTSQEQSSTTNTGTINPDWSSFQAYSPMPPHGFLASSPQAHPYMWGVQHIIPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTQGTSANGIHSKSGESASEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGSSVHTQNGGLNTPHTVVNQTMSVIPMSASGAPGAVPGPTTNLNIGMDYWGTPTSSNIPALRGKVPSTAVAGGMVTAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENASLRSEVSRIRSEYEQLLSENAALKERLGELPGNDDVKSGRNDQHVGNDTQQSDETEAVQGAH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 370 408 - -
Gabi4206g00028 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 305 327 - -
Gabi4206g00028 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 19 41 - -
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 111 227 - -
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 146 227 - -
Gabi4206g00028 408 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 1 41 - -
Gabi4206g00028 408 Coils Coil 324 372 - -
Gabi4206g00028 408 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 397 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 389 408 - -
Gabi4206g00028 408 Pfam Disordered region downstream of MFMR 135 271 - -
Gabi4206g00028 408 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Gabi4206g00028 408 Gene3D - 307 361 - -
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 1 18 - -
Gabi4206g00028 408 MobiDBLite consensus disorder prediction 374 388 - -
Gabi4206g00028 408 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Gabi4206g00028 408 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
Gabi4206g00028 408 Pfam G-box binding protein MFMR 1 96 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4206g00028 Gabi-Chr4206 284003 293651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00028 1 402 bZIP Transcription Factor Family AT2G35530 63.171 4.95e-169 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4206g00028 MFMR_assoc 4.7e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00028 K09060 - gmx:778122 726.857