Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00012 ATGGAACTATTCCCAGCACAACCAGACTTATCCTTGCAAATCAGCCCTCCAAACAGCAAACCCACATCAAGTTGGAGGAGAAGTACTACAGAAGAAGACATGGACTTGGGGTTTTGGAAGAGAGCTTTGGACTCTAGAAACTCCTTATCATCATCATCATCAATGTCCAAAAAGGATACTTGCTTTGATCATGACCTCTCCCTCTCTAATCCAAAGGCTTCAGATTCCAACACCTCCAACCTCATTCATCACTTCCAAAACGGTAATGCCAATCCCTTCCAAACATTTCAGCAAAACCATTACTTCCACAACCAGCCACTTTTCCACCACCACCAACAACAACCACAAATCCAAAGCCTAAGCCAAGAACTTGGTTTTCTCAGACCCATCAGAGGAATCCCAGTATACCAGAACCCTCCTCCTATGCCATTCTCTCAACAACAACAACAACATCAACATCAACATCAACATCATCATCATCCCTTAGAGGCTTCCACCCCTTCATCTATTTCCAACACAACCACAGGTTCAAGCCCTTTTCAGTCTCAAGCTTTGTTGAGGTCGAGGTTCTTGTCACGCTTCCCTCCTAAACGAAGCATGAGAGCTCCTCGGATGCGTTGGACTACCACTCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTCTTGGGTGGCCATGAAAGGGCTACGCCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCACTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCGGCTTCTTCAGGGCAATCGGATGTATACGATAATGGATCATCTGGAGATACTTCTGATGACTTAATGTTTGACATGAACTCTTCAAGAAGGTCTGATCTACCCATTAAGCAGGGAAGATCAAGTGTTAATCAAGATAAGGAATATTATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGCAAGCCAAAGGCTGATTCTGTTGGAAACGTGCCTTCTGTTGAGAAGGAAATGGATCCAAAGTGCCTAAGTTACGAGAGAATATCAGATGGAAGCTCATCGTCAAGCCTATCAGGATCAAGCCCCAAGAAACCTATTTTGGATTTGGAATTCACCTTGGGCCAGCCACTTTGA 1152 0.4497 MELFPAQPDLSLQISPPNSKPTSSWRRSTTEEDMDLGFWKRALDSRNSLSSSSSMSKKDTCFDHDLSLSNPKASDSNTSNLIHHFQNGNANPFQTFQQNHYFHNQPLFHHHQQQPQIQSLSQELGFLRPIRGIPVYQNPPPMPFSQQQQQHQHQHQHHHHPLEASTPSSISNTTTGSSPFQSQALLRSRFLSRFPPKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDMNSSRRSDLPIKQGRSSVNQDKEYYGLWSNSSREAWLHGKPKADSVGNVPSVEKEMDPKCLSYERISDGSSSSSLSGSSPKKPILDLEFTLGQPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00012 383 Gene3D - 202 259 - -
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 353 368 - -
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 261 304 - -
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 138 182 - -
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 11 25 - -
Gabi4206g00012 383 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 256 IPR006447 GO:0003677
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 351 383 - -
Gabi4206g00012 383 Pfam Myb-like DNA-binding domain 204 255 IPR001005 -
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 163 182 - -
Gabi4206g00012 383 SUPERFAMILY Homeodomain-like 200 256 IPR009057 -
Gabi4206g00012 383 MobiDBLite consensus disorder prediction 1 30 - -
Gabi4206g00012 383 FunFam Myb family transcription factor 201 259 - -
Gabi4206g00012 383 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 382 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4206g00012 Gabi-Chr4206 89231 93951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00012 1 382 G2-like Transcription Factor Family AT4G17695 37.379 1.71e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4206g00012 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00012 - - aprc:113868756 612.838