Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4206g00002 ATGACGAAGGCAAAACACATGAAAATAGTTGTACTCGGCCATGGCAATGGTGGCATAGTCTATAAAGTTCATCACAAGAAGAACAATTCCCTTTATGCATTAAAGGTCCTACGCTTCAATCAGAATTCCATTGGCATCCGTCAACCCGCTACACTCGAGGCTGAGATTCTTAAACGAGTGGATTCCCCTTATATAGTAAAGTGTCATGCAGTTTTTGATAAAGGTGCATTGAGAAGTGATGCAGGTCATATTAGCTTTGTTATGGAATACATGGAAGGAGGATCGTTGCATGATGTGTTGAGAGAACACCATAGACTCCCCGAGAGGGTGATTTCTGTCTTGGCTAACCGTGTGTTGGAAGGGCTGAACTATTTGCACGGCATGCACATTGTGCATAGATATATTAAACCCTCAAACTTGCTTGTGAATGACAAGGGAGAGGTGAAGATTTCAGATTTTGGAGTTAGTCATGTGGTGGAAGGAAGGTTAGAGGAAACTGACTCCAACGCTGGTACATGTGCCTACACCTGA 531 0.4313 MTKAKHMKIVVLGHGNGGIVYKVHHKKNNSLYALKVLRFNQNSIGIRQPATLEAEILKRVDSPYIVKCHAVFDKGALRSDAGHISFVMEYMEGGSLHDVLREHHRLPERVISVLANRVLEGLNYLHGMHIVHRYIKPSNLLVNDKGEVKISDFGVSHVVEGRLEETDSNAGTCAYT 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4206g00002 176 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Gabi4206g00002 176 Pfam Protein kinase domain 9 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4206g00002 176 Gene3D Transferase(Phosphotransferase) domain 1 5 176 - -
Gabi4206g00002 176 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 6 175 - -
Gabi4206g00002 176 ProSiteProfiles Protein kinase domain profile. 6 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4206g00002 176 SUPERFAMILY Protein kinase-like (PK-like) 11 175 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4206g00002 Gabi-Chr4206 11604 12377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4206g00002 8 175 MAP Kinase Kinase Gene Family AT1G32320 52.976 2.05e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gabi4206g00002 Pkinase 2.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4206g00002 K20604 - gmx:100817973 263.077