Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4203g00005 ATGGGAGTGGACTACTACAAGATTCTTCAGGTAGATAGAAGCGTCAAAGATGATGATCTCAAGAAAGCATATCGAAAGCTTGCAATGAAGTGGCATCCTGATAAGAACCCTAACAACAAAAAAGAGGCTGAAGCTAAATTCAAGCAAATCTCCGAAGCATATGATGTTTTGAGTGATCCACAGAAGCGAGCAGTGTATGATCAGTATGGTGAGGAGGGGTTGAATGGACAGGTGCCGCCGCCGGATGCCGGCGGTTTCCCTGGCAGCAGTGACGGCGGGCCAACAACGTTCCGGTTTAACCCAAGAAGTGCTGATGATATATTTTCTGAGATTTTTGGGTATTCAAGCCCCTTTGGTGGAATGGGGGACATGGGTGGTCGTGTTGGTGCCTCTGGATTTAGGAGGCCCACCACAGTAGAGGAGATCCTAACTATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCTGAAAAGGGAAATGAACAGAGAGGAGTTATCCCAGCAGACCTTGTCTTTGTTATTGATGAGAAGCCTCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTGTCACTCAAAAGATATCTCTTGTAGAAGCCCTGACAGGTTACACAGCGCAGCTGACAACGCTCGATGGGCGTAATCTTACAATCCCCATTAACTCCGTCGTTAGTCCAACATATGAAGAAGTTGTTAAAGGAGAGGGTATGCCTATTCCCAAAGAACCTTCAAAGAAGGGAAACTTGAGAATCAAGTTCAATATTAAGTTTCCCTCCAGGCTTACATCAGAACAGAAAAGTGGCATTAAGCGATTATTGACATCTCCATAA 843 0.4472 MGVDYYKILQVDRSVKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLNGQVPPPDAGGFPGSSDGGPTTFRFNPRSADDIFSEIFGYSSPFGGMGDMGGRVGASGFRRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFVIDEKPHSVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRNLTIPINSVVSPTYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4203g00005 280 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gabi4203g00005 280 CDD DnaJ_C 137 265 - -
Gabi4203g00005 280 Pfam DnaJ domain 4 67 IPR001623 -
Gabi4203g00005 280 CDD DnaJ 4 59 IPR001623 -
Gabi4203g00005 280 SUPERFAMILY HSP40/DnaJ peptide-binding domain 185 271 IPR008971 GO:0006457|GO:0051082
Gabi4203g00005 280 SMART dnaj_3 3 62 IPR001623 -
Gabi4203g00005 280 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 135 277 - -
Gabi4203g00005 280 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gabi4203g00005 280 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gabi4203g00005 280 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gabi4203g00005 280 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gabi4203g00005 280 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gabi4203g00005 280 SUPERFAMILY HSP40/DnaJ peptide-binding domain 136 183 IPR008971 GO:0006457|GO:0051082
Gabi4203g00005 280 Gene3D - 126 181 - -
Gabi4203g00005 280 SUPERFAMILY Chaperone J-domain 3 90 IPR036869 -
Gabi4203g00005 280 FunFam DnaJ subfamily B member 13 183 263 - -
Gabi4203g00005 280 Gene3D DnaJ domain 3 122 IPR036869 -
Gabi4203g00005 280 MobiDBLite consensus disorder prediction 71 97 - -
Gabi4203g00005 280 Gene3D - 183 263 - -
Gabi4203g00005 280 FunFam DnaJ subfamily B member 13 3 122 - -
Gabi4203g00005 280 Pfam DnaJ C terminal domain 104 262 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4203g00005 Gabi-Chr4203 29165 32396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4203g00005 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 1.35e-09 56.6