Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4203g00004 ATGGGAGTGGACTACTACAAGATTCTTCAGGTAGATAGAAGCGTCAAAGATGATGATCTCAAGAAAGCATATCGAAAGCTTGCAATGAAGTGGCATCCTGATAAGAACCCTAACAACAAAAAAGAGGCTGAAGCTAAATTCAAGCAAATCTCCGAAGCATATGATGTTTTGAGTGATCCACAGAAGCGAGCAGTGTATGATCAGTATGGTGAGGAGGGGTTGAATGGACAGGTGCCGCCGCCGGATGCCGGCGGTTTCCCTGGCAGCAGTGACGGCGGGCCAACAACGTTCCGGTTTAACCCAAGAAGTGCTGATGATATATTTTCTGAGATTTTTGGGTATTCAAGCCCCTTTGGTGGAATGGGGGACATGGGTGGTCGTGTTGGTGCCTCTGGATTTCCCATGGGTGGCATGTTTAGTGAAGATATTTTTGCTCAACTTAGGAGTGGAGCTGGAGAGGGTTCTGTAGAGGAGATCCTAACTATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCTGAAAAGGGAAATGAACAGAGAGGAGTTATCCCAGCAGACCTTGTCTTTGTTATTGATGAGAAGCCTCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTGTCACTCAAAAGATATCTCTTGTAGAAGCCCTGACAGGTTACACAGCGCAGCTGACAACGCTCGATGGGCGTAATCTTACAATCCCCATTAACTCCGTCGTTAGTCCAACATATGAAGAAGTTGTTAAAGGAGAGGGTATGCCTATTCCCAAAGAACCTTCAAAGAAGGGAAACTTGAGAATCAAGTTCAATATTAAGTTTCCCTCCAGGCTTACATCAGAACAGAAAAGTGGCATTAAGCGATTATTGACATCTCCATAA 894 0.4452 MGVDYYKILQVDRSVKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLNGQVPPPDAGGFPGSSDGGPTTFRFNPRSADDIFSEIFGYSSPFGGMGDMGGRVGASGFPMGGMFSEDIFAQLRSGAGEGSVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFVIDEKPHSVFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRNLTIPINSVVSPTYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4203g00004 297 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gabi4203g00004 297 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 294 - -
Gabi4203g00004 297 Pfam DnaJ domain 4 67 IPR001623 -
Gabi4203g00004 297 CDD DnaJ 4 59 IPR001623 -
Gabi4203g00004 297 FunFam DnaJ subfamily B member 13 3 122 - -
Gabi4203g00004 297 SMART dnaj_3 3 62 IPR001623 -
Gabi4203g00004 297 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gabi4203g00004 297 Pfam DnaJ C terminal domain 155 279 IPR002939 -
Gabi4203g00004 297 Gene3D - 200 280 - -
Gabi4203g00004 297 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 200 IPR008971 GO:0006457|GO:0051082
Gabi4203g00004 297 Gene3D - 142 198 - -
Gabi4203g00004 297 CDD DnaJ_C 156 282 - -
Gabi4203g00004 297 SUPERFAMILY HSP40/DnaJ peptide-binding domain 202 288 IPR008971 GO:0006457|GO:0051082
Gabi4203g00004 297 Gene3D DnaJ domain 3 122 IPR036869 -
Gabi4203g00004 297 MobiDBLite consensus disorder prediction 71 97 - -
Gabi4203g00004 297 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gabi4203g00004 297 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gabi4203g00004 297 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gabi4203g00004 297 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gabi4203g00004 297 SUPERFAMILY Chaperone J-domain 3 73 IPR036869 -
Gabi4203g00004 297 FunFam DnaJ subfamily B member 13 200 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4203g00004 Gabi-Chr4203 29165 32398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4203g00004 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 1.77e-09 56.6