Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4201g00001 ATGCTACCTTCCCTTCTTTTATTTATAACTCACCTTCACCCCATCTTACTCTGTCTACAATTACAATTTACAACCTTTGAACCATTTACTGTTCTTTTCTTTCTTTCTTTTTCTTTTTCTAAAACAACAAATTACTCTCTTTCTCTTTCTTTTTCTTGGACCAAGATGGCACCTTCATTCGATCAAAGTGTTAACACAGTTTGTGTAATGGATGCTTCGGGCCAGTTAGGTACCAGTTTGGTCGAGCGATTACTTCAAAAGGGATACACCGTTCATGCCTCTATTCAAACACATGGAGAAGAGCAATTTAATGGGATTTCAGCTGACACAAACAGGCTTAAGATTTTCCGTTCAGACCCATTTGATTATCATAGCATAACCGATGCTCTCAAAGGTTGCTCTGGCTTGTTCTATACATTTGAACCACCTCAAGACCAACCCAACTATGATGAATACATAGCAGACGTTGAAGTCAGAGCCGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACCATTGATAAAGTGGTTTTCACATCCTCTGCAACCGCAATCGTTTGGAAGGAGGATCGCAAGTCCATGGAATGTGATTTGGATGAGCGACATTGGAGTGATGTCAATTTCTGTCGTAAATTCAAGTTGTGGCATGGGATGTCAAAGACACTGGCAGAGAAGACAGCGTGGGCATTGGCAATGGACAGAGGGTTAAACATGGTGTCCATCAACGCAGGCTTATTGATGGGTGATGATCTCACCATCAAGTACCCGTACTTGAGAGGAGCTGCGGAGATGTATGAAGATGGTGTATTGGTGACTGTAGATTTAGGAATCTTGGTGGATTCCCACATCTCTGTCTACGAGGATGTCTCATCCTACGGTCGATATTTGTGCTTCAACCACATCATCAACACCCACGACGACGCCGTTCAGCTTGCCCGCAAGTCAACTTCTGTAGCTCCTTCCTTACCTCAAAGCCGTGACCAAGGTAAGGGTTTTATCCAGCAAAGAATAAGCAACAGGAAGTTGAAGAAATTGATGGTGAATTCATTGGGTTGA 1059 0.4287 MLPSLLLFITHLHPILLCLQLQFTTFEPFTVLFFLSFSFSKTTNYSLSLSFSWTKMAPSFDQSVNTVCVMDASGQLGTSLVERLLQKGYTVHASIQTHGEEQFNGISADTNRLKIFRSDPFDYHSITDALKGCSGLFYTFEPPQDQPNYDEYIADVEVRAAHNVLEACAQTETIDKVVFTSSATAIVWKEDRKSMECDLDERHWSDVNFCRKFKLWHGMSKTLAEKTAWALAMDRGLNMVSINAGLLMGDDLTIKYPYLRGAAEMYEDGVLVTVDLGILVDSHISVYEDVSSYGRYLCFNHIINTHDDAVQLARKSTSVAPSLPQSRDQGKGFIQQRISNRKLKKLMVNSLG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4201g00001 352 Pfam NAD(P)H-binding 72 186 IPR016040 -
Gabi4201g00001 352 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 66 323 - -
Gabi4201g00001 352 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 59 352 - -
Gabi4201g00001 352 CDD FR_SDR_e 67 348 - -
Gabi4201g00001 352 Gene3D - 59 351 - -
Gabi4201g00001 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 66 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4201g00001 Gabi-Chr4201 11423 19843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4201g00001 66 343 Monolignol Biosynthesis Gene Families AT5G58490 33.224 2.25e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4201g00001 - - gmx:100790333 497.664