Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00058 ATGGCGACTCACTCAAACACCTCATTTTCCCTTTCGCAAGGAAAAGAGAACAACACTATTGCCATTGGGCTTCTTCTCTGTCTCGTAATAATAATCATTGTAGTGGTTGTTTCTCTGATCCTTGATCGTGTTCTCATCCACTACAAAGATGAAGTTAAGTGGATAGTGAGAGAATTGGAGTCACTAGAAGCTCTGATAAAAGATTATGATCAACTTGTGGAGGAAGGGCACAAGGTAGAATCACGAGCCTGTCGTTTCTGGAATTCAGAAGACCTATCTGGGATTCATCTGCAGCTAAGTGAAGCTGAGAGTAATTGGGTAAAATCAACAAGAAAAGTGGTTGGCGATGCAAAAGACTGTGTCACCAACTACTACAAACAAAGCCGAGGAGTGCTTCGTGTTTTTCCCACGGCTATCTTCAGATTAATACCCATTAAAAATGTTCGTGATCAAATACATGTGGTCAGAAGAAAGATGGAAGCTCACATAACAAAGACAGATGAAGATCCAAAGGACATCTATAAATCCATGGAGAGGTCAAGATCTCAGAATAGAAGTCTCCTGGACCAATATACAATTGAAGAGACCAATATATCTGTAGAAGCACAAAATCAAAATCAAAATCAAAATCAAAATCAAAATCAAAAGCAAAAGAAGCCTTCTACAAGTATAGATGAACTAATAATGAAGATCAAAGACCAAATTTCTAGCATGGAAGAGAGATGGTCTATATATCTGCTACTTCCACTGCATGCTTTCGTGATGGATTTGAGTCAGCTTCAGTTAGAAACTGAAACAGAAAAGCTCTGGAAAAGAGAAGCGGAAAAATTAATTTCAGAAGCAGAGGCCAGCATTAGCAAATTCTCATGGTGGGTTTCAAGATTTAGCAGATCAAATAATTACATTCCCATAGTAACGCATCAATTCAGAGTGGACATGAAGCGCATTGTCACTGACTTTGATGGCCTGCTTGCAAGGAAGGACAAGTATAAATTCGCTTTTATCGATAGAGCTGCACAAAAGTCAACCTTCACATACAATACAGATGACAATGAAATCACATCAGCTGTAAGAAGCATCCGCAGCCAGCAGATCAAGCGTGATTGGAGCCCAAAGCAAGTAGCTGAAATCATCTCAATGTGTCAAGCATTGGAAGAAAGGCATAAAGAGCTTCAGAGAACAGAAGAAACAGCGGGGAGAACCGCTTGTTTAGAGCTACTAAAGTCCATGGCAAAGGAGGTGGACATTTTTCTGGAAAAATATATGGAAGAACCTGAGCTCAATCGTCGAGAGATCAGAAATGCTATTGATTTTCTACAGAATATAACAAAAATTTGCAGCATCGAAAGACAGAAGTCAACCAAAGTAGTTGGTGTGAAAAATGAAGTACGGGATTTAGTCTCGAAGCTGACCACGAGTACTGGCAATCCTTCGACACTTTCCATAGTAGGGATGATAGGTGTGGGGAAGACAACTCTTGCAAAGGCAATTTTTTACAACAAAGTTGTTGTCCAGCACTTCCCTATTCGTGTCTGGGTGACATTAACCGAAGGAGCTGCCTACAAAGCACAAGTTTTACTGATGAAAGAGGATGGGACTAAAGACCAGACATTGTATGTCACTCAGGTATGTGATCACTTGAAAGAGAAGCAATGCCTTGTTGTTCTAGATAATGTCTCAAAAACAGAAGATTTTGATAAAGTAAACCAAAGATTATCTGGATCTGGATGGGCAAATGGGAGCAGAATATTGCTGACGACACGCTTTAAGAATGTGGCCTTGCATCCTGACAGCATTAGCACCCCTCATCAAATTCGACTACTAACAAAGGAAGAGAGTTTGGCGTTGTTTGTGAGGTTGACCGGCACCGAATGGACCGAATCAGAACGACAAGTGAAAAAACTTGCAAGAAAGGTAGTGGCAAGATGCGGGGGCTTACCAGTTGCAATCTTATCTCTTGGGTGTGTCATGTCAGCTAAAGGCATGACTGAAAATAACTTAATGTGGGTGCTTGATCGAATCAATCATGGCCTTCACAAAGCACAATGGCTGCAAGCTTGGGAAAAGAACAAGCAAGAACTGAGTGAAACTCTGAGTAACTGTCTTTATTACTTCACACTCTTCCCTGTAGACTTTGAAATCCCAGCACGGAGATTAGTTAATCTATGGGTTGCGGAAGAATTGGTGGAACAAAACGAACAGCAGACACCCGAAGACACTGCAGAAGGGTATTTAGAAGAGTTGAGAGACTGCAACATGATTCAAGTAGTGGCACTAAAGTCTAATTCCAAGATCAAGACATGTCGCCTGCCATGTATGCTCAGAGAAATCATATTGCGAGGAAGCGACAGAATAAACCACAGCCAGTGCTCAGTTACACGATTAGAGCGTCGATTTGCCTACTGTTTTGATGACCGTGGTCTTGATGCAAATTCGGCAAACGTATTCAGCAAGAAAGAAATTCCCCAATCTGTTTTTTTCTTTGACAAGCGAGAGGGAAGTAAGCCGGGAGAACACATAAGGAAGATCCTTTCAACAGGCCTGGCAAGTGAGCAGTTCATGGAGATAAGAGTTCTTGATCTAGAACGTGTGTTCAGACCTCAGTTGCCTAAGACTTCGAGTAAGTTAATTCATCTTAAGTACCTTAGCTTAAGGTGGACTTACTTGGAGGAATTGCCACCATTCATAGGTAAACTTCTGAACCTGGAAACACTGGATTTAAAGCATACATGTATCCGTGTCCTCCCTAGTTCGATCTGGAAATTGAAGAAGCTGAGGAACTTATATCTGAACCATAAATATCGAAGTAGACTCGAGGGCAAGCTGCGTGGAAACTTTCAGGAGAATCTCCGCACACTATGGGGTGTGTTCATGTATGGGAGTTGCCCTCTTCTTCCTGATCTTCACAGGCTGAAGAACCTTGAAAAATTAAAATTAGCTTTCCAGTTGACCAAAAAAGAGCAAAAGACACTTGCCAGCATGATTGTGCAACTTAACCAGCTTCATTCATTGAGGCTAAGATCAGTAGATGAAATGGGTGATCCTGAACAACTAAAATTGAAAGACATGTCAATGCTGGAGAAGCTCTCATCCCTCCAGTTGTTTGGGAATTTAGAGGATAGACTACGCAGCAGCCGTCTCCCAAACAACATTACTGATCTCACCTTGTCTGCTTCAAAACTGTCATATGATCCTATGCCAGAGTTGCAGAACCTGCGCGAGCTTAGGTCACTGTGTTTTTATGCTGGCTCTTATACAGGAAACATCATGGTTTGTACCACAGGAAGCTTTCAAAAACTTGAAGTGCTGAGATTATGGAATTTATGGGACCTGGAAAAATGGGTGGTGGAGGAAGGAGCAATGCCTAGCCTCGTGGAGTTTGAAGCCCGCAAGTGCGAAAATCTGGCAGTTCCCACTGGGTTGAGGCATTTGAACACTCTTCGCTGGATAAAGTTGCATGAAATGCCACAGCCATTCATGGAGGAAATCTTAAATCTTAGGGAGACGTTATTGGATGACGTTGAGATTGCTCATTGA 3537 0.4184 MATHSNTSFSLSQGKENNTIAIGLLLCLVIIIIVVVVSLILDRVLIHYKDEVKWIVRELESLEALIKDYDQLVEEGHKVESRACRFWNSEDLSGIHLQLSEAESNWVKSTRKVVGDAKDCVTNYYKQSRGVLRVFPTAIFRLIPIKNVRDQIHVVRRKMEAHITKTDEDPKDIYKSMERSRSQNRSLLDQYTIEETNISVEAQNQNQNQNQNQNQKQKKPSTSIDELIMKIKDQISSMEERWSIYLLLPLHAFVMDLSQLQLETETEKLWKREAEKLISEAEASISKFSWWVSRFSRSNNYIPIVTHQFRVDMKRIVTDFDGLLARKDKYKFAFIDRAAQKSTFTYNTDDNEITSAVRSIRSQQIKRDWSPKQVAEIISMCQALEERHKELQRTEETAGRTACLELLKSMAKEVDIFLEKYMEEPELNRREIRNAIDFLQNITKICSIERQKSTKVVGVKNEVRDLVSKLTTSTGNPSTLSIVGMIGVGKTTLAKAIFYNKVVVQHFPIRVWVTLTEGAAYKAQVLLMKEDGTKDQTLYVTQVCDHLKEKQCLVVLDNVSKTEDFDKVNQRLSGSGWANGSRILLTTRFKNVALHPDSISTPHQIRLLTKEESLALFVRLTGTEWTESERQVKKLARKVVARCGGLPVAILSLGCVMSAKGMTENNLMWVLDRINHGLHKAQWLQAWEKNKQELSETLSNCLYYFTLFPVDFEIPARRLVNLWVAEELVEQNEQQTPEDTAEGYLEELRDCNMIQVVALKSNSKIKTCRLPCMLREIILRGSDRINHSQCSVTRLERRFAYCFDDRGLDANSANVFSKKEIPQSVFFFDKREGSKPGEHIRKILSTGLASEQFMEIRVLDLERVFRPQLPKTSSKLIHLKYLSLRWTYLEELPPFIGKLLNLETLDLKHTCIRVLPSSIWKLKKLRNLYLNHKYRSRLEGKLRGNFQENLRTLWGVFMYGSCPLLPDLHRLKNLEKLKLAFQLTKKEQKTLASMIVQLNQLHSLRLRSVDEMGDPEQLKLKDMSMLEKLSSLQLFGNLEDRLRSSRLPNNITDLTLSASKLSYDPMPELQNLRELRSLCFYAGSYTGNIMVCTTGSFQKLEVLRLWNLWDLEKWVVEEGAMPSLVEFEARKCENLAVPTGLRHLNTLRWIKLHEMPQPFMEEILNLRETLLDDVEIAH 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00058 1178 Coils Coil 374 401 - -
Gabi4191g00058 1178 Pfam NB-ARC domain 461 700 IPR002182 GO:0043531
Gabi4191g00058 1178 Gene3D - 690 780 IPR036388 -
Gabi4191g00058 1178 PRINTS Disease resistance protein signature 643 657 - -
Gabi4191g00058 1178 PRINTS Disease resistance protein signature 546 560 - -
Gabi4191g00058 1178 PRINTS Disease resistance protein signature 897 913 - -
Gabi4191g00058 1178 PRINTS Disease resistance protein signature 479 494 - -
Gabi4191g00058 1178 PANTHER DISEASE RESISTANCE PROTEIN RP 273 1120 IPR044974 GO:0006952
Gabi4191g00058 1178 SUPERFAMILY L domain-like 852 1167 - -
Gabi4191g00058 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 704 IPR027417 -
Gabi4191g00058 1178 Gene3D Ribonuclease Inhibitor 831 1176 IPR032675 -
Gabi4191g00058 1178 Coils Coil 199 219 - -
Gabi4191g00058 1178 Gene3D - 437 599 IPR027417 -
Gabi4191g00058 1178 Pfam Leucine rich repeat 878 932 IPR001611 GO:0005515
Gabi4191g00058 1178 MobiDBLite consensus disorder prediction 166 186 - -
Gabi4191g00058 1178 Coils Coil 55 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00058 Gabi-Chr4191 712910 716446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00058 480 650 WRKY Transcription Factor Family AT5G45050 25.414 7.22e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00058 - - tpra:123886737 1334.32