Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00028 ATGGAGCCGGTGGAGAGCTTACCCTTGGAGACGGCGGAGAAGATAATTCTCCGGTGGGACTCCACCGCGTCGGAGGAAGCACGTGAGAAGATGATCTTCGAGGGTGACAGGGAAGAGGTGGATCTGTACCTTCGTGCCGTTGATGAAATCCAACGTTCCATGTCCACCGCCACCATCTCCGACGAACAGAGCAAGGTCAACTCTTCCATTCAGATCGCCATGGCACGCTTGGAAGATGAGTTTCGCAACATCCTCATCTCTAACACCAACCCCATCGACACAAGTTCCTCTCTTCACCACCCCAACACTGAAGAAGACGATGAACAACAAGAACCACCACGAGAACACCAACAACAACACCATGCTTCTTCTTCTTCTTCTTCTTCAACTTCAGCTAGCTACCGTTCTGCAAGTAGCATCCGTGAGATCGATCTGCTACCTGGTGATGCTGTTGAAGACCTTCGTTGCATCGCAGAGAGGATGATCTCTTGCGGTTACTTGAGAGAGTGCATCCAGGTTTATGGAAGTGTGAGGAAATCTGCTGTTGATGCAAGTTTTCGAAGGCTTGGGGTTGAGAAGTTGAGCATCGGTGATGTTCAGAGGTTGGAGTGGGAGCAACTTGAGGCCAAGATCAGAAGATGGATAAGAGCTGCTAAGGTTTGTGTTAGGACCTTGTTTGCAAGTGAGAAGAAGCTCTGTGAGCAAATCTTTGATGGGGTTGGAACTGCTATTGATGATGCTTGCTTCATGGAAACTGTTAAGGGACCTGCTATTCAGCTTTTCAACTTTGCTGAGGCTATTAGCATAAGCAGGAGGTCACCTGAGAAGCTTTTCAAGATTCTTGACCTTCATGATGCTTTGATGGATTTGATTCCTGATATTGATCTTGTGTTTGATTCTAAGTCCTCTGAGTCAATTAGGGTTCAGGCTGCTGAGATTTTGTCTCGGTTGGCTGAGGCTGCAAGAGGGATTCTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACTAGGTATGTGATGAATTATATAAGTTTGATATCTGATTACAAGCAGACTCTGAATGAGCTTATAGTGTCTAAACCATCAACGGGGTCTAGATATTCTGGTGATCCTTCTACCCCTGATATGGATTTTGCTGAGCTGGAGGGGAAAACCCCTTTGGCTATTCACTTGATTTGGATTATTGTGATATTGCAATTTAACTTGGATGGTAAGTCCAAGCATTATAAGGATGCGTCCTTGTCTCACCTCTTCATAATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGGTCTTCTGAATTGAGGGAGATGATTGGAGATGATTATTTGAAGAAGCTGACAGGGAAATTCAGGCAGGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGTTTACATGTGAGTGGTGGTTTTTCTTCTGGGGTCTCGAAGAGTGCTTTGAGGGAAAGATTTAAGGCCTTCAATGCTATGTTTGAGGAGGTTCATAGGACTCAAGCTGTTTGGTTGATACCGGATTCGCAACTCAGGGAGGAGCTTAGAATTTCTATATCAGAGAAGCTGATCCCAGCATATAGGTCATTTCTTGGGCGGTTCAGGAGCCACATAGAGAGTGGAAGACATCCAGAGAACTATATTAAGTATTCTGTTGAGGACCTGGAGGATGCTGTTTTGGATTTTTTCGAAGGAATTCCTGTTTCCCAGCACTTGAGGAGGAGATCTGAATGA 1800 0.4578 MEPVESLPLETAEKIILRWDSTASEEAREKMIFEGDREEVDLYLRAVDEIQRSMSTATISDEQSKVNSSIQIAMARLEDEFRNILISNTNPIDTSSSLHHPNTEEDDEQQEPPREHQQQHHASSSSSSSTSASYRSASSIREIDLLPGDAVEDLRCIAERMISCGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDLVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFAELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSSELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSE 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00028 599 MobiDBLite consensus disorder prediction 88 133 - -
Gabi4191g00028 599 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 587 IPR004140 GO:0000145|GO:0006887
Gabi4191g00028 599 FunFam Exocyst subunit Exo70 family protein 26 593 - -
Gabi4191g00028 599 Gene3D Exocyst complex component Exo70 15 595 - -
Gabi4191g00028 599 MobiDBLite consensus disorder prediction 99 118 - -
Gabi4191g00028 599 MobiDBLite consensus disorder prediction 119 133 - -
Gabi4191g00028 599 Pfam Exo70 exocyst complex subunit 213 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi4191g00028 599 Coils Coil 591 599 - -
Gabi4191g00028 599 SUPERFAMILY Cullin repeat-like 26 586 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00028 Gabi-Chr4191 378487 381586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00028 9 599 EXO70 exocyst subunit family AT1G72470 69.854 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00028 K07195 - qsa:O6P43_018425 984.171