Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00026 ATGGAGCCGGTGGAGAGCTTACCCTTGGAGACGGCGGAGAAGATAATTCTCCGGTGGGACTCCACCGCGTCGGAGGAAGCACGTGAGAAGATGATCTTCGAGGGTGACAGGGAAGAGGTGGATCTGTACCTTCGTGCCGTTGATGAAATCCAACGTTCCATGTCCACCGCCACCATCTCCGACGAACAGAGCAAGGTCAACTCTTCCATTCAGATCGCCATGGCACGCTTGGAAGATGAGTTTCGCAACATCCTCATCTCTAACACCAACCCCATCGACACAAGTTCCTCTCTTCACCACCCCAACACTGAAGAAGACGATGAACAACAAGAACCACCACGAGAACACCAACAACAACACCATGCTTCTTCTTCTTCTTCTTCTTCAACTTCAGCTAAACGCCATGATGATCATGATGCTGATGCTGATGCTGATGCTGATGTTGATGTTGTTATTGATGATAAGCTTCTTCGTTTTGATAGTAGCGGTGCTGCTTCTGTTTCCAGCATCACCACCAGTGGCAGTAGCTACCGTTCTGCAAGTAGCATCCGTGAGATCGATCTGCTACCTGGTGATGCTGTTGAAGACCTTCGTTGCATCGCAGAGAGGATGATCTCTTGCGGTTACTTGAGAGAGTGCATCCAGGTTTATGGAAGTGTGAGGAAATCTGCTGTTGATGCAAGTTTTCGAAGGCTTGGGGTTGAGAAGTTGAGCATCGGTGATGTTCAGAGGTTGGAGTGGGAGCAACTTGAGGCCAAGATCAGAAGATGGATAAGAGCTGCTAAGGTTTGTGTTAGGACCTTGTTTGCAAGTGAGAAGAAGCTCTGTGAGCAAATCTTTGATGGGGTTGGAACTGCTATTGATGATGCTTGCTTCATGGAAACTGTTAAGGGACCTGCTATTCAGCTTTTCAACTTTGCTGAGGCTATTAGCATAAGCAGGAGGTCACCTGAGAAGCTTTTCAAGATTCTTGACCTTCATGATGCTTTGATGGATTTGATTCCTGATATTGATCTTGTGTTTGATTCTAAGTCCTCTGAGTCAATTAGGGTTCAGGCTGCTGAGATTTTGTCTCGGTTGGCTGAGGCTGCAAGAGGGATTCTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACTAGGTATGTGATGAATTATATAAGTTTGATATCTGATTACAAGCAGACTCTGAATGAGCTTATAGTGTCTAAACCATCAACGGGGTCTAGATATTCTGGTGATCCTTCTACCCCTGATATGGATTTTGCTGAGCTGGAGGGGAAAACCCCTTTGGCTATTCACTTGATTTGGATTATTGTGATATTGCAATTTAACTTGGATGGTAAGTCCAAGCATTATAAGGATGCGTCCTTGTCTCACCTCTTCATAATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGGTCTTCTGAATTGAGGGAGATGATTGGAGATGATTATTTGAAGAAGCTGACAGGGAAATTCAGGCAGGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGTTTACATGTGAGTGGTGGTTTTTCTTCTGGGGTCTCGAAGAGTGCTTTGAGGGAAAGATTTAAGGCCTTCAATGCTATGTTTGAGGAGGTTCATAGGACTCAAGCTGTTTGGTTGATACCGGATTCGCAACTCAGGGAGGAGCTTAGAATTTCTATATCAGAGAAGCTGATCCCAGCATATAGGTCATTTCTTGGGCGGTTCAGGAGCCACATAGAGAGTGGAAGACATCCAGAGAACTATATTAAGTATTCTGTTGAGGACCTGGAGGATGCTGTTTTGGATTTTTTCGAAGGAATTCCTGTTTCCCAGCACTTGAGGAGGAGATCTGAATGA 1929 0.4567 MEPVESLPLETAEKIILRWDSTASEEAREKMIFEGDREEVDLYLRAVDEIQRSMSTATISDEQSKVNSSIQIAMARLEDEFRNILISNTNPIDTSSSLHHPNTEEDDEQQEPPREHQQQHHASSSSSSSTSAKRHDDHDADADADADVDVVIDDKLLRFDSSGAASVSSITTSGSSYRSASSIREIDLLPGDAVEDLRCIAERMISCGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLEAKIRRWIRAAKVCVRTLFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDLVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFAELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSSELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00026 642 Pfam Exo70 exocyst complex subunit 256 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi4191g00026 642 Gene3D Exocyst complex component Exo70 20 139 - -
Gabi4191g00026 642 MobiDBLite consensus disorder prediction 99 118 - -
Gabi4191g00026 642 FunFam Exocyst subunit Exo70 family protein 138 636 - -
Gabi4191g00026 642 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 630 IPR004140 GO:0000145|GO:0006887
Gabi4191g00026 642 MobiDBLite consensus disorder prediction 88 145 - -
Gabi4191g00026 642 Gene3D Exocyst complex component Exo70 141 638 - -
Gabi4191g00026 642 SUPERFAMILY Cullin repeat-like 26 629 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00026 Gabi-Chr4191 378487 381586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00026 9 642 EXO70 exocyst subunit family AT1G72470 68.711 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00026 K07195 - qsa:O6P43_018425 983.015