Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00025 ATGTCAACTTTCCCTGATACGGTGTCCGATGGCCGGAGGTCCGGCAAGGCTCCGGAGAAGTCCAATTTCTCACAAACTTGCAGCCTCTTGAGCCAGTTCTTGAAGGAGAAGAGAAGTTCTGGAGCTTCTACCCATGGAATTGGTGGGAAAATGGAGCATAGAGCTAGTAGGAAGGATTTGTTAGCCAACCAGCAAAACTCAGATGGGGCTTTGAAACTAAATGCTTCAGCTATGGATTTTCTTCCCCAGCTTGTGGAAAATCCCTGCATTAAGAAGTCCAATGTTAGGTCACCGGGGCAAGAAGAATCTCCCCAATTGACAATATTCTATGCCGGAAAAATGCTTGTATTTGATGCCTTTCTACCTGAGAAGGCAACGGAGGTCATGGAATTAGCCACCAAGTTAGCCTCTGACAATTCCAGCACCGCAGAAAGTCCCCCAAATGTTACAATTTCTACTGAAAAATTGAATTCATCCAAAGTGCCTCAGACAAACACTACCTCAGAAACCCCTAAACCAGGAAACCAAGTTGGTTCAGATATGAGGTATCCAAGGAGAGCTTCACTCCTAAAATTCCTTGAGAAAAGAAAAGAAAGGGTCATTGCTAGAGGACCTTACCAAATTAACAACAACAACCCCAAGCGTGAGGGAAGCAGTTCAGGAGGTGAACCTGAAGATCAGTGTTCCGAACACTTTGACCTTAACTTGTAG 711 0.4501 MSTFPDTVSDGRRSGKAPEKSNFSQTCSLLSQFLKEKRSSGASTHGIGGKMEHRASRKDLLANQQNSDGALKLNASAMDFLPQLVENPCIKKSNVRSPGQEESPQLTIFYAGKMLVFDAFLPEKATEVMELATKLASDNSSTAESPPNVTISTEKLNSSKVPQTNTTSETPKPGNQVGSDMRYPRRASLLKFLEKRKERVIARGPYQINNNNPKREGSSSGGEPEDQCSEHFDLNL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00025 236 Pfam tify domain 101 132 IPR010399 -
Gabi4191g00025 236 SMART tify_2 99 134 IPR010399 -
Gabi4191g00025 236 MobiDBLite consensus disorder prediction 136 184 - -
Gabi4191g00025 236 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 216 IPR040390 -
Gabi4191g00025 236 MobiDBLite consensus disorder prediction 201 236 - -
Gabi4191g00025 236 Pfam Jas motif 185 207 IPR018467 -
Gabi4191g00025 236 MobiDBLite consensus disorder prediction 136 175 - -
Gabi4191g00025 236 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Gabi4191g00025 236 MobiDBLite consensus disorder prediction 1 24 - -
Gabi4191g00025 236 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00025 Gabi-Chr4191 351631 353625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00025 14 199 Tify Gene Family AT1G72450 33.824 1.13e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi4191g00025 tify 8.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00025 K13464 - gmx:100778559 359.762