Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00017 ATGTTCTTCTCAATCTTCACCACCGTCATTGTTCTTTCTCTCTCAACTTCTCTCTCATACTCCACGGACTTATTCCTCTACGGCGGGTGCACACAACAAAGGTACAACCCTAACTCGCCCTACGAGTCAAACCTCAACTCGCTCCTCTCCTCGCTGATAAACTCAGCCACCTTCTCCTCTTACAACAACTTCACCGTCGTAGGTTCAAGCCCCAACGACGTCGTTTACGGCCTTTACCAGTGCCGCGGCGACCTCGCCATGCAGGACTGCGCCTCCTGCGTATCTCGCGCTGTCTCACGCGCCGGCGACCTCTGCCCGGAGGCTTGCGGCGGCGCCGTCCAGCTCGACGGTTGCTTCGTGAAGTACGACAATGCGACATTCTTGGGGGTGGAGGACAAGACGGTGGTGCTGAGGAAGTGCGGGCCGTCCGTCGGGTACGACCCGAATTCGATGGGTGTAAGGGATGCGGTCTTGTCCGGGTTGGCGGGTTCGGGTGGGTATTTTCGGGTTGGCGGGTCGGGTGTGTTGAAGGGTGTGGCGCAGTGCACCGGTGACTTGAGCTTCGCTGAGTGTCAAGACTGCGTGGCGGAGGCGATCCGACGGCTGAGGAGCGATTGCGCCGCCGCCGGTTACGGGGATATGTTCTTGGCCAAGTGTTACGCCAGGTACTCCACTGGTGGGGCCCACGCTTACTCCAAGGCCCATGGTAAATCAGGCAATGAAGGTGAAAAGACATTTGCCATAATTATTGGATTATTGGCAGGTGTAGCTATACTTATTATTTTCCTTGCTTTCTTGAGGAGGATTTGTGAGGGACAAGGTAAATAA 828 0.5592 MFFSIFTTVIVLSLSTSLSYSTDLFLYGGCTQQRYNPNSPYESNLNSLLSSLINSATFSSYNNFTVVGSSPNDVVYGLYQCRGDLAMQDCASCVSRAVSRAGDLCPEACGGAVQLDGCFVKYDNATFLGVEDKTVVLRKCGPSVGYDPNSMGVRDAVLSGLAGSGGYFRVGGSGVLKGVAQCTGDLSFAECQDCVAEAIRRLRSDCAAAGYGDMFLAKCYARYSTGGAHAYSKAHGKSGNEGEKTFAIIIGLLAGVAILIIFLAFLRRICEGQGK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00017 275 FunFam cysteine-rich repeat secretory protein 3 22 127 - -
Gabi4191g00017 275 Pfam Salt stress response/antifungal 175 225 IPR002902 -
Gabi4191g00017 275 Pfam Salt stress response/antifungal 30 124 IPR002902 -
Gabi4191g00017 275 Gene3D - 22 127 IPR038408 -
Gabi4191g00017 275 Gene3D - 145 226 IPR038408 -
Gabi4191g00017 275 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
Gabi4191g00017 275 ProSiteProfiles Gnk2-homologous domain profile. 128 228 IPR002902 -
Gabi4191g00017 275 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00017 Gabi-Chr4191 265560 266646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00017 10 224 Pollen Coat Proteome AT4G20670 28.033 6.73e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00017 - - gmx:100811615 386.726