Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00009 ATGGCTTCTTCCTTGGATATGTCACTTGATGATAGAATAAAGAACAGGAGTAACAGAGGGAGAGGTAGAGGACGTGGCAGAGCCCGTCCTGGGCGTGGACCAAGCGGGACTCTTAATGGTGGAAGAATGACTGGTGCTGTTAATGGTAGAAGAATGACTGGTGCTTTTAATGGTGGAAGAATGACCGGTTCTGTTCGCAGAGGTCCTCTTATGGTTAACGCTCGGGCATCATCTTATGCTATTGCAAAGTCTATTCGCAGAACCAGGCCTTTTCCATGGCAGCATGATTTGTTTGAAGATAGCTTAAGAGCTGCAGGGATTCAAGGAATAGAAGTCGGCACTAAGTTGTATGTTTCCAACCTGGACCATGGAGTAACCAATGAAGACATAAGGGAACTTTTCTCTGAGCTTGGAGATTTGAAGCGTTATGCTGTTCATTATGACAAAAATGGACATCCAAGTGGTTCTGCTGAAGTTGTCTATACTAGAAGAAGTGATGCATTTGCTGCTCTGAAACGATATAATAATGTACTGTTGGATGGAAAGCCCATGAAGATTGAGATTGTTGGTAGTAATGGCGAATTGCCCATAACTGCTCGTGTGAATGTCACTGGGGTGAATGGGCGGAGGAAGAGGACAGTTGTAATGACGTCTAGAGGAGGACGAGGTGGAGGTCCTGCTGTGCCTAATCGTGGTGCTGGATGGGGACGGCGAGGTGGCACAAGGAATGCGAGTGGCATAAGGAATGGGGATGGGACTGGGACTGGACGTGGTCGTGGAGGACGTGGTCGTGGTAGGGGGGGTGGAGGACGTGGGCGTGGCAGAAACGATGCTGTTGAGAAGTCAGCTGCAGATCTTGACAAGGAACTGGAGACCTACCATGCTGAGGCCATGCAGATCTCATGA 906 0.4868 MASSLDMSLDDRIKNRSNRGRGRGRGRARPGRGPSGTLNGGRMTGAVNGRRMTGAFNGGRMTGSVRRGPLMVNARASSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGIEVGTKLYVSNLDHGVTNEDIRELFSELGDLKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNGELPITARVNVTGVNGRRKRTVVMTSRGGRGGGPAVPNRGAGWGRRGGTRNASGIRNGDGTGTGRGRGGRGRGRGGGGRGRGRNDAVEKSAADLDKELETYHAEAMQIS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00009 301 MobiDBLite consensus disorder prediction 270 286 - -
Gabi4191g00009 301 MobiDBLite consensus disorder prediction 1 61 - -
Gabi4191g00009 301 SMART FoP_duplication_2 229 301 IPR025715 -
Gabi4191g00009 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 184 IPR000504 GO:0003723
Gabi4191g00009 301 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 299 - -
Gabi4191g00009 301 MobiDBLite consensus disorder prediction 216 286 - -
Gabi4191g00009 301 CDD RRM_THOC4 114 188 - -
Gabi4191g00009 301 Coils Coil 276 296 - -
Gabi4191g00009 301 SMART rrm1_1 115 187 IPR000504 GO:0003723
Gabi4191g00009 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 114 191 IPR000504 GO:0003723
Gabi4191g00009 301 Pfam C-terminal duplication domain of Friend of PRMT1 239 295 IPR025715 -
Gabi4191g00009 301 Gene3D - 110 190 IPR012677 -
Gabi4191g00009 301 SUPERFAMILY RNA-binding domain, RBD 43 188 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00009 Gabi-Chr4191 146186 150998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00009 113 188 Eukaryotic Initiation Factors Gene Family AT2G23350 38.158 3.53e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00009 K12881 - gmx:100820344 455.292