Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4191g00003 ATGATTCAACCTCAAACCCGTTTGAATGTAGCGGATAATAGTGGAGCCCGAGAATTGATGTGTATTCGAATTATAGGAGCTAATAATAAACGATATGCTTCTATTGGTGATATTGTTGTTGTTGTAGTAAAGGAAGCAGTACCAAATACGTCCTTAGAAAGATCAGAAGTGATCGAAGCTGTAAATGTACGTACTTGTAAAGAACTCAAACGCAGTAACGGTATAATAATACACTATGATGATAATACTGCGGTTGTTATTGACCAAAAGGGAAATCCAAAAAGAACTCGAATTTTTTGTGCAATCACCCGTGAATTGAGACATTTAAATTTTGTGACTGTTACAGATGTTCGGGGTCAGGTGATTTCTTGGTCCTCCGCCGGTACTCTTGGGTTCAAAGGTACTCGGAGGGGAACACCATTTGCAACTCAAATCGCAGCAGGAAATGCTATTAGAATGGTTGCGGATCAAGGCATGCAACAAGCAGAAGTCATGATAAAAGGTCCCGGTCTCTGA 516 0.4012 MIQPQTRLNVADNSGARELMCIRIIGANNKRYASIGDIVVVVVKEAVPNTSLERSEVIEAVNVRTCKELKRSNGIIIHYDDNTAVVIDQKGNPKRTRIFCAITRELRHLNFVTVTDVRGQVISWSSAGTLGFKGTRRGTPFATQIAAGNAIRMVADQGMQQAEVMIKGPGL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4191g00003 171 Gene3D Ribosomal protein L14 1 118 IPR036853 GO:0003735|GO:0005840|GO:0006412
Gabi4191g00003 171 Pfam Ribosomal protein L14p/L23e 1 117 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gabi4191g00003 171 NCBIfam 50S ribosomal protein L14 1 122 IPR005745 GO:0003735|GO:0006412|GO:0015934
Gabi4191g00003 171 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 115 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gabi4191g00003 171 Pfam Ribosomal protein S11 111 170 IPR001971 GO:0003735|GO:0005840|GO:0006412
Gabi4191g00003 171 SUPERFAMILY Translational machinery components 111 170 - -
Gabi4191g00003 171 Hamap 50S ribosomal protein L14 [rplN]. 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gabi4191g00003 171 SMART Ribosomal_L14_2 1 122 IPR000218 GO:0003735|GO:0005840|GO:0006412
Gabi4191g00003 171 SUPERFAMILY Ribosomal protein L14 1 115 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4191g00003 Gabi-Chr4191 61744 63345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4191g00003 8 109 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 33.962 5.76e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4191g00003 K02874 - gmx:3989333 191.815