Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00073 ATGGAAGTATTCACCCTTGCTGATATTGTCGGTTGCTGTGGAATATCATCAACACGTCCAGATATGGCAGAGTTCACCCTTGTCGAGATTGTGGCAGCAACCAACAACTTCTCCCATGAGATTGGTGCTGGAAGTGGTGTTCTGTATTGAGGCCAACTTGATGTTGTAGTTGCAGTCAAAAGGGAGGAAACTGGTACTACTAAGGTGAAGATTTTTCAAGAGAAAGAGAGTAGACCTGAGTCTGAAAAGAGAAAGATGTCTTTCGTGTCACGTCTACACCACAAGAACTTGGTTAGGCTAGTTGGGTTCTGTGAAGTGAAAGATGAAAGGCTACCCTTGGTGTACGAGTACCCGAAGAAAGGAACCTTACATGATCATCTGCACGAGAAGAGTAGTGGTGTCTTGAGTTCTTGGAAAATGAGGATCAAAATTGCGCTGGATGATTCCCGAGGAATCGAATATTTCCATAATTATAGAGTTGCATGCATAATTTACGGAGATATACAGTCTTCTAACATTCTCATTCATGCGACTTGGACTGCAAAAGTATGTGATTTTGGATTGTTATCGATGTGTCCAGACTCTGACCATGATTACGTACCAGTTGGATATATTGATCTTGAATATCATAGTGTAAATGTTATGAAATCAAAGAGCGATGTCTATATTGCAAAAGAAAGAAAAAAGAGTGATGTGTATGGGCTTGGAGTGGTACTGCTAGAACTCTTAACGGGAAAGAAAGCTATATTCAAGGATGGTGAAAATGGAGGCACCCCTCTGAGTGTGGTAGACTTTGCAGTGCCTGCATTAATGACTCGTGAATTGGAGAGAATTTTGGACGAGAGGGTAGTGTTAAATGAAATAGAAGCAGTGGAGCTTACGGCCTCCACTGTCAAGCTGTGTGTAAATTTTGAAGGGATAGACAGACCAACAATTTCTTACACGTGA 948 0.4156 MEVFTLADIVGCCGISSTRPDMAEFTLVEIVAATNNFSHEIGAGSXGVLYXGQLDVVVAVKREETGTTKVKIFQEKESRPESEKRKMSFVSRLHHKNLVRLVGFCEVKDERLPLVYEYPKKGTLHDHLHEKSSGVLSSWKMRIKIALDDSRGIEYFHNYRVACIIYGDIQSSNILIHATWTAKVCDFGLLSMCPDSDHDYVPVGYIDLEYHSVNVMKSKSDVYIAKERKKSDVYGLGVVLLELLTGKKAIFKDGENGGTPLSVVDFAVPALMTRELERILDERVVLNEIEAVELTASTVKLCVNFEGIDRPTISYT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00073 316 Pfam Protein tyrosine and serine/threonine kinase 37 312 IPR001245 GO:0004672|GO:0006468
Gabi4184g00073 316 Gene3D Transferase(Phosphotransferase) domain 1 120 316 - -
Gabi4184g00073 316 SUPERFAMILY Protein kinase-like (PK-like) 17 314 IPR011009 -
Gabi4184g00073 316 Gene3D Phosphorylase Kinase; domain 1 9 118 - -
Gabi4184g00073 316 ProSiteProfiles Protein kinase domain profile. 35 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4184g00073 316 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 21 314 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00073 Gabi-Chr4184 714511 715459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4184g00073 24 314 Receptor kinase-like Gene Family AT3G55950 49.371 2.66e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi4184g00073 PK_Tyr_Ser-Thr 5.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00073 - - gmx:100798905 328.176