Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00064 ATGGAAGAATCAAGTGAATTGCAATCAGAAGAAAATAAAGTCTCTATGGAGAAAAATAAGAAAAGAAAGCTCAAAACACCTGCCCAGGTTACGGCCTTGGAGAAATTTTATAATGAGCACAAGTATCCCACAGAGGAAATGAAATCACAAGTTGCTGAGGAGATAGGGTTGACAGAAAAGCAGATATCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAAATTATTGAAAGGTGAAGCATTTGCTAATGGACGACAAGATCATTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGACTTGGGCAAGATTCATGTGGAAGCAGTAAACATGGTGACTATAGGCATCTAGATCCAAAAGAGGTTGAGAGTCATGGCCTCTACAATCATGATTTTTCAGTAGCCGATATGACCTATGGACATAGGAACCATTATACAGAAAATGTCAGTGGAATGGATGATACATCATCTGAGAGCAGCTCTTTTTTGCGAGATCCACTTCGACATGATGTGGAGCCTTCTAGATATCTAACACCTAATGGAGTTCTTTCACCTGTAAACTCCAAGGGTGCAATTAACATGGGATATAAACCATCAGGATATTTGAAAGTGAAGGGCGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGCATTATCAGGAAGATGGTCCGCTACTTGCTGTAGAATTTGATCCACTTCCTCCAGGGGCATTTGAATGCCAAACTGCGGATCCAGTTCATGAACCATACTGTGTTGCAAATCTTGTTCATCCGAATTCTCCAGAAATCTCTGCTGTAAAAAGGAAACCCAGTCTTAGCTCTAGAGATGATTCACATTATACTAAATTTAGTTCCCGAGATTCACATATGGAAGGAGTTGACTTCGGCTCGTTGCATGACACTGATTTCCAGCGTAAACAGGATAAGAAAGGCCGCCAGAATATTAAACAAAGGCAAAGTCTTTACAGTTATACCGATCATTTTCCTGGCAGGAACTCTTCCCTGGATTTGTATGAAGACTCTACCGGAGAAGCATCTGCTCATAATGGCACTAAGAATCATAGAATGGGCACTAAGCATGGTGTTGAGGGGATGAGATCTGATTCTGCTTCTAACCACAGTGATCACTATGAAGAGAACCTTGCAGTTAAGCAGACAGAGTTGCTGCTACATGGCTATGATAACATCAATCCAAGAAATGTGCAAAGGAGTGAACATGTAAAATCTAAGCCTTTAAATTCAAACCGTAATTCTCGAGTTTCTGTGGATACTGCAGAAAGAGGACTATCTACTAGGATGTCAAAGGAACAGATGTTTAAGGGGGACAGGAAGGCAAAAAAGCAACATCGCAACGCAGATGGATCAGGGATGCTTTCAAATGAAATCACAGTCACAAAACGAGTTAAAGTTGATGATATGCCTCAGCCGTACAATGTGAAACAATCACCTGTTGCTGAGATGGAACAAAGGAAAAATCAGAGATCTGCTGCAGAGATGCCATCTAGCTTTAGCGAGGATGAAACTGCTGAAACCAGTTCCTCAATGGATTAA 1566 0.4106 MEESSELQSEENKVSMEKNKKRKLKTPAQVTALEKFYNEHKYPTEEMKSQVAEEIGLTEKQISGWFCHRRLKDKKLLKGEAFANGRQDHSSGVIQDRGSGLGQDSCGSSKHGDYRHLDPKEVESHGLYNHDFSVADMTYGHRNHYTENVSGMDDTSSESSSFLRDPLRHDVEPSRYLTPNGVLSPVNSKGAINMGYKPSGYLKVKGEIEHAAITAVKKQLGRHYQEDGPLLAVEFDPLPPGAFECQTADPVHEPYCVANLVHPNSPEISAVKRKPSLSSRDDSHYTKFSSRDSHMEGVDFGSLHDTDFQRKQDKKGRQNIKQRQSLYSYTDHFPGRNSSLDLYEDSTGEASAHNGTKNHRMGTKHGVEGMRSDSASNHSDHYEENLAVKQTELLLHGYDNINPRNVQRSEHVKSKPLNSNRNSRVSVDTAERGLSTRMSKEQMFKGDRKAKKQHRNADGSGMLSNEITVTKRVKVDDMPQPYNVKQSPVAEMEQRKNQRSAAEMPSSFSEDETAETSSSMD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 441 456 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 88 106 - -
Gabi4184g00064 521 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 521 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 274 320 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 408 521 - -
Gabi4184g00064 521 Gene3D - 8 92 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 418 433 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 87 111 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 267 324 - -
Gabi4184g00064 521 SUPERFAMILY Homeodomain-like 18 84 IPR009057 -
Gabi4184g00064 521 SMART HOX_1 18 80 IPR001356 GO:0003677
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 345 364 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 490 521 - -
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 1 25 - -
Gabi4184g00064 521 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Gabi4184g00064 521 CDD homeodomain 20 75 IPR001356 GO:0003677
Gabi4184g00064 521 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Gabi4184g00064 521 MobiDBLite consensus disorder prediction 7 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00064 Gabi-Chr4184 535249 541715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4184g00064 3 521 Homeobox Transcription Factor Family AT4G03250 42.279 2.10e-95 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gabi4184g00064 Homeodomain 3.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00064 - - gmx:100803515 830.476