Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00025 ATGAAAAAAATGATGCACTACTTTCTCATTTCTAGGTTTGCTTCTTCCTTCCCAATCCCAAACCGCAGCCAATTGAATCTCGTTCGACAAAATGCTTTCCTTTTCTTCACGGCACCGGCTAGCTTTTCTGAACCAAAACGTAATCAGCTCAAATATGACAACTTTACGGTCTCTTACCTCATCACCTCATGTGGGTTGCCCCCCGAAACCGCTGCACGAGTGTCCAGTAATGTACGATTGAAAACCCTAGATAAGTCAAATGCGGTCCTGAATCTTCTCAAGAACTTCGGATTCTCCAAAAACCAGATTGCCAAATGTGTGCAGAAAATACCCTCGCTGCTTAATGTTAACGCAGAGAAGACCCTTTTGCCCAAATTCAAGTTCTTCCGCTCTATTGGGGTTTCAAACATTGATTTCCCGGAATTCATCATTGATAATCCTACAGTCTTGTCAAGGAGCTTGAACAAGTGTCTTATTCCTCGTTATAAGGTCCTCAGGAGTGTTGTTCGTAGTGATGAGGAAGTTGTTGGAGCTTTGAAGCGCAGGGCACTTTGGTACAAAGATTTGATGAATGATTTGGTTCCAAACATTAGTGTTTTGAGAGAGTCTGGTGTGCCTCAGGCTTCCATCTCTCACTTGGTGATGTTTAACCCATTTACAGCGTATAAGGAACATTCAAAATTTGTGGAAGCTGTCAAGTTAGCTAAGGAAATGGGAGTTGATCCTCTGAAAACAATTTTTGTCAGTGCTATCCGCGTGCTAATCAGTTTGGACAATGCACAGTGGGAATCGAGATTAGAGGTTTACAAGAAGTGGGGTTGGTCTCGCGAAATCACTCTGTCAGTATTTAGAAAGTATCCAACTATTATGTCCTATACAGAGGAGAGGATTACAAAATCAATGAATTTCCTGGTGAAGGATATGGGTTGGCCACCGGAGGATATTGCTAGATTCCCTGCGGCTCTAGCCTACAACTTTGAGAAGAGGATTGTCCCCAGATGTGCTGTAATTAAAATCTTGCAATCAAAACGTCTGCGAAGGAATTCCTTAGGCTTGGCTTCCTTTATGGCCGTGAGCGAGGAAAACTTTTTGAAGACATTCGTGACTGAATTTCTGGATGATGTGCCTCTCCTGCTGGATGTATATCGAGGTTTGATTGATCATCAAGATGTACTATAG 1179 0.4258 MKKMMHYFLISRFASSFPIPNRSQLNLVRQNAFLFFTAPASFSEPKRNQLKYDNFTVSYLITSCGLPPETAARVSSNVRLKTLDKSNAVLNLLKNFGFSKNQIAKCVQKIPSLLNVNAEKTLLPKFKFFRSIGVSNIDFPEFIIDNPTVLSRSLNKCLIPRYKVLRSVVRSDEEVVGALKRRALWYKDLMNDLVPNISVLRESGVPQASISHLVMFNPFTAYKEHSKFVEAVKLAKEMGVDPLKTIFVSAIRVLISLDNAQWESRLEVYKKWGWSREITLSVFRKYPTIMSYTEERITKSMNFLVKDMGWPPEDIARFPAALAYNFEKRIVPRCAVIKILQSKRLRRNSLGLASFMAVSEENFLKTFVTEFLDDVPLLLDVYRGLIDHQDVL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00025 392 PANTHER CGI-12 PROTEIN-RELATED 55 369 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 Pfam mTERF 90 241 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 Pfam mTERF 254 364 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 Gene3D Transcription termination factor 3, mitochondrial 158 373 IPR038538 -
Gabi4184g00025 392 FunFam Mitochondrial transcription termination factor-like 154 375 - -
Gabi4184g00025 392 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 SMART mt_12 312 346 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 SMART mt_12 245 275 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 SMART mt_12 32 67 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Gabi4184g00025 392 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00025 Gabi-Chr4184 181035 185687 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi4184g00025 mTERF 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00025 K15031 - gmx:100788793 374.785