Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00023 ATGATGCACTATTTTCTCATTTCTAGGTTTGCTTCTTCCTTCCCAATCCCAAACTGCAGCCAATTGAATTTCGTTCGACAAAATGCTTTCCTTTTCTTCACGTCATCGGCTACCTTTTCTGAACCAAAACGTAATCAACACCAAGATGACAACTTTACGGTCTCTTACCTCATCACCTCATGTGGGTTGTCCCCCGAAACCGCTGCACGAGTGTCCAGTAATGTACGATTGAAAACCCTAGATAAATCAAATGCGGTCCTGGATCTTCTCAAGAACTTCGGATTCTCCAAAAACCAGATTGCCAAATGTGTGCAGAAAATACCCTCGCTGCTTAATGTTAAAGCAGAGAAGACCCTTTTGCCCAAACTCAAGTTCTTCCGCTCTATTGGGATTTCAAACATTGATTTCCCAGAATTCATCATTTATAATCCTGCACTCTTGAAAAGGAGCTTGAACAAGTGTCTTATCCCTCGTTATAAGATCCTCAGGAGTGTTGTTCGTAATGATGAGGAAGTTGTTAGAGCTTTGAAGGGCAGGGCACTTTGGTACAATGATATGATGAATGATTTGGTTCCAAACATTAGTGTTTTGAGAGAGTCTGGTGTGCCTCAGGCTTCCATCTCTCACTTGGTGATTTTTCACCCATTTTCGGCGTATAAGGAACATTCAAAATTTGTGCAAGCTGTCGAGTTAGCTAAGGATATGGGGCTTGATCATTTGAAAAGAATTTTTGTCAGTGCTATCCGCGTGCTAATCAGTCTGGACAATTCACAGTTGGAATCGAGATTAGAGGCTTTCAAGAAGTGGGGTTGGTCTCGCGAAATCACTCTGTCAGTATTTAGAAAGTATCCAACTATTATGTCCTATACAGAGGAGAGGATTACAAAATCAATGAATTTCCTGGTGAAGGATATGGGTTGGCCGCTGGATGATATTGCTAGATTCCCTGCGGCTCTAGCCTACAACTTTGAGAAGAGGATTGTCCCCAGATGTGCTGTGATTAAAATCTTGAAATCAAAAGGTCTGCTAGGGAGTTGCTTTGGCTTGGGTTCCTTTATGGCCATGAGCGAGGAAAACTTTTTGAAGACGTTTGTGACTGAATTTCTGGATGATGTGCCTCTCCTACTGGATGTATATCGAGGTTTGATTGATCATCAAGATGTACGATAG 1170 0.4197 MMHYFLISRFASSFPIPNCSQLNFVRQNAFLFFTSSATFSEPKRNQHQDDNFTVSYLITSCGLSPETAARVSSNVRLKTLDKSNAVLDLLKNFGFSKNQIAKCVQKIPSLLNVKAEKTLLPKLKFFRSIGISNIDFPEFIIYNPALLKRSLNKCLIPRYKILRSVVRNDEEVVRALKGRALWYNDMMNDLVPNISVLRESGVPQASISHLVIFHPFSAYKEHSKFVQAVELAKDMGLDHLKRIFVSAIRVLISLDNSQLESRLEAFKKWGWSREITLSVFRKYPTIMSYTEERITKSMNFLVKDMGWPLDDIARFPAALAYNFEKRIVPRCAVIKILKSKGLLGSCFGLGSFMAMSEENFLKTFVTEFLDDVPLLLDVYRGLIDHQDVR 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00023 389 Gene3D Transcription termination factor 3, mitochondrial 168 370 IPR038538 -
Gabi4184g00023 389 FunFam Mitochondrial transcription termination factor-like 151 372 - -
Gabi4184g00023 389 Pfam mTERF 250 361 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 Pfam mTERF 87 238 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 SMART mt_12 242 272 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 SMART mt_12 22 64 IPR003690 GO:0003690|GO:0006355
Gabi4184g00023 389 PANTHER CGI-12 PROTEIN-RELATED 51 366 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00023 Gabi-Chr4184 173239 176203 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi4184g00023 mTERF 8.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4184g00023 K15031 - gmx:100788793 365.54