Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4184g00019 ATGGGTGTTGCAAAAGGAGAATTCAGCGTGAGTGTGACAAAGGAGGAGGTGGTAGCGGCGGTGTTGCCAATGCATGACTACCACTGGCTGCCACTGTCTAACCTTGACTTACTTCTTCCCCAGGTGGACGTAGGCGTCTTCTTTTGCTACAAGAATCCTACTTCAGGGGACACTAGTGGCACCAACAACAACACCAACACCAACACCATGAGCTTTGGATCAATGGTGGGGTCTCTGAAAAATGCCTTAGCTCAGGCTCTTGGTTCCTATTACGCTTTTGCTGGTGAAGTGGTGCTCAACTCCATGGGTGAACCTGAGCTTCTTTGCAATAACCGTGGGGTAGATTTTGTTGAAGCTGTGGCTGATGTTGAGCTACGGTGCCTCAATTTGTACAACCCAGATGTCACCGTTGAAGGGAAGCTTGTTCCAACCAAGAAGCACGGCGTGCTTGCTGTTCAGGCAACTAGGCTGAAGTGTGGTGGGGTAGTAGTGGGATGCACTTTTGACCATCGCATTGCCGATGCCTACTCTGCAAACATGTTCTTTGTATCATGGGCCGATATAGCCCGGCCCAACAAGCCCATAACCACAACGAGGCCTTGTTTTCGGCGCTCCCTTCTCATCCCAAGACGACCACCATCCATTCACCCTTCACTCCATCACATGTATGTCCCCATCTCCGACCTCCCCCCTCCGCCGGAACCCGAATCCAAACCCGTATCCGGATCCAACCCACTCATCAGCCGCATATACCATGTCACATGCGAACAACTCAACCGCATGCAGTCACTGGCCAGCTCAGCTAGCAGCGTCAAGCGCACAAAGCTTGAGTCTTTCTCTGCATTCTTGTGGAAGATGGTTGCTGCAGCCAGTGTTGATGAAGATGATGATGATGATGATCACAAAAGGGTCATTGTAGCCAAAATGGGTGTTGTGGTTGATGGAAGGAAGAGGCTCAGCAATGGTGATAAGAACAAGGAAGAAAGGATGAGTTCATATTTCGGCAACGTGCTTTCCATTCCCTTTAGTGGGAAACCGGCGGAGGAGCTGGTGGAAAAGCCGCTGAGTTGGGTGGCGGAGCAAGTTCATGAGTTTTTGGATACGGCGGTGACGGAGGAGCACTTCTTGGGGCTCATTGATTGGGTGGAAGCACACAGGCCAGTGCCAGGGTTGGCAAGGATATGTTGTGGGAGCACAAGAGAAGAAGGACCAGCTTTTGTGGTGTCTTCAGGTCAAAGGTTTCCGGAGTCAAAGGTTGACTTTGGATGGGGGAAGGCTGTGTTTGCATCGTACCATTTTCCTTGGGGTGGAGATGCTGGTTATGTGATGCCAATGCCTAGCCCTGATGGCAATGGTGACTGGTTGGTCTACATGCACCTTCTCAAGCCCCATTTGGACTTTATTGAGTCTCGGGCTTCCCATATCTTTAGGCCCTTCTCTTGGGATTGTCTTATCAATGAACTTTGA 1467 0.5072 MGVAKGEFSVSVTKEEVVAAVLPMHDYHWLPLSNLDLLLPQVDVGVFFCYKNPTSGDTSGTNNNTNTNTMSFGSMVGSLKNALAQALGSYYAFAGEVVLNSMGEPELLCNNRGVDFVEAVADVELRCLNLYNPDVTVEGKLVPTKKHGVLAVQATRLKCGGVVVGCTFDHRIADAYSANMFFVSWADIARPNKPITTTRPCFRRSLLIPRRPPSIHPSLHHMYVPISDLPPPPEPESKPVSGSNPLISRIYHVTCEQLNRMQSLASSASSVKRTKLESFSAFLWKMVAAASVDEDDDDDDHKRVIVAKMGVVVDGRKRLSNGDKNKEERMSSYFGNVLSIPFSGKPAEELVEKPLSWVAEQVHEFLDTAVTEEHFLGLIDWVEAHRPVPGLARICCGSTREEGPAFVVSSGQRFPESKVDFGWGKAVFASYHFPWGGDAGYVMPMPSPDGNGDWLVYMHLLKPHLDFIESRASHIFRPFSWDCLINEL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4184g00019 488 Pfam Transferase family 9 474 - -
Gabi4184g00019 488 Gene3D - 233 470 IPR023213 -
Gabi4184g00019 488 Gene3D - 7 225 IPR023213 -
Gabi4184g00019 488 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4184g00019 Gabi-Chr4184 133461 136793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4184g00019 33 469 Monolignol Biosynthesis Gene Families AT5G48930 27.556 4.57e-38 142